PH01002621G0030's details annotation 1.Annotation ICBR annotation: retinoblastoma-related protein-like, putative, expressed
Blast result AT3G12280 : 0.00E+00 Blast annotation: retinoblastoma-related 1 2.Location Scaffold: PH01002621 Strand: - Region | Start | End | gene | 33936 | 41792 | mRNA | 33936 | 41792 | exon | 33936 | 35435 | exon | 35604 | 35676 | exon | 36539 | 36651 | exon | 36738 | 36864 | exon | 36982 | 37095 | exon | 37172 | 37345 | exon | 37430 | 37502 | exon | 37615 | 37771 | exon | 38704 | 39571 | exon | 39657 | 39847 | exon | 40279 | 40330 | exon | 40522 | 40672 | exon | 40881 | 40927 | exon | 41029 | 41125 | exon | 41221 | 41516 | exon | 41600 | 41792 | CDS | 35149 | 35435 | CDS | 35604 | 35676 | CDS | 36539 | 36651 | CDS | 36738 | 36864 | CDS | 36982 | 37095 | CDS | 37172 | 37345 | CDS | 37430 | 37502 | CDS | 37615 | 37771 | CDS | 38704 | 39571 | CDS | 39657 | 39847 | CDS | 40279 | 40330 | CDS | 40522 | 40672 | CDS | 40881 | 40927 | CDS | 41029 | 41125 | CDS | 41221 | 41516 | CDS | 41600 | 41659 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000481 | proton-transporting two-sector ATPase complex, proton-transporting domain, proton-transporting V-type ATPase, V0 domain, SNF2 Transcription_Regulator(from iTAK) Phagosome Oxidative_phosphorylation ATP hydrolysis coupled proton transport, hydrogen ion transmembrane transporter activity, RB Transcription_Regulator(from iTAK) DDT Transcription_Regulator(from iTAK) clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit, mediator complex, PHD Transcription_Regulator(from iTAK)
| coexpression network | CFinderM001140 | RB Transcription_Regulator(from iTAK) nucleus, regulation_of_cell_cycle SNF2 Transcription_Regulator(from iTAK) Drug_metabolism_-_cytochrome_P450 Metabolism_of_xenobiotics_by_cytochrome_P450 Glutathione_metabolism
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | RB |
8.Protein domain
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0005634 | nucleus | GO:0051726 | regulation of cell cycle |
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