Gene details

Annotation of co-expression genes

PH01002938G0200's details annotation

1.Annotation

ICBR annotation: DEAD-box ATP-dependent RNA helicase, putative, expressed

Blast result AT5G27680 : 9.00E-108
Blast annotation: RECQ helicase SIM

2.Location

Scaffold: PH01002938
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001839	GPI anchor metabolic process, DNA methylation, DNA recombination, Base_excision_repair Ubiquitin_mediated_proteolysis
coexpression network	CFinderM001855	Base_excision_repair GPI anchor metabolic process, DNA recombination,
coexpression network	CFinderM001869	DNA recombination, (1->3)-beta-D-glucan biosynthetic process, 1,3-beta-D-glucan synthase complex, Ubiquitin_mediated_proteolysis

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding
GO:0006310	DNA recombination
GO:0008026	ATP-dependent helicase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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