Gene details

Annotation of co-expression genes

PH01002970G0200's details annotation

1.Annotation

ICBR annotation: transcription factor S-II, central domain containing protein, expressed

Blast result AT5G11430 : 1.30E-83
Blast annotation: SPOC domain / Transcription elongation factor S-II protein

2.Location

Scaffold: PH01002970
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001014	SET Transcription_Regulator(from iTAK) endoplasmic reticulum, nucleus, ubiquitin ligase complex, histone_methylation
coexpression network	CFinderM001101	SET Transcription_Regulator(from iTAK) histone_methylation histone_lysine_methylation Lysine_degradation nucleus, ubiquitin ligase complex, histone-lysine N-methyltransferase activity, histone_binding RNA_degradation transcription, DNA-dependent, protein ubiquitination,
coexpression network	CFinderM001357	bHLH Transcription_Regulator(from PlantTFDB) SET Transcription_Regulator(from iTAK) Lysine_degradation nucleus, histone_methylation histone_lysine_methylation protein dimerization activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005634	nucleus
GO:0006351	transcription, DNA-dependent
GO:0008270	zinc ion binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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