CFinderM001101's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SET Transcription_Regulator(from iTAK)0.009341217GFam
histone_methylation0.015617431GO:0016571
histone_lysine_methylation0.017163073GO:0034968
Lysine_degradation0.017960379KEGG
nucleus,0.022366441GO:0005634
ubiquitin ligase complex,0.022366441GO:0000151
histone-lysine N-methyltransferase activity,0.027779891GO:0018024
histone_binding0.027779891GO:0042393
RNA_degradation0.030405325KEGG
transcription, DNA-dependent,0.035690707GO:0006351
protein ubiquitination,0.035690707GO:0016567

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000005G4150FRIGIDA-like proteinAT5G48385 (2.00E-127)
PH01000377G0810Tetratricopeptide repeat (TPR)-like superfamily proteinAT1G76630 (0.00E+00)
PH01000391G0470-- (-)
PH01000556G0480SU(VAR)3-9 homolog 1AT5G04940 (1.00E-157)
PH01002970G0200SPOC domain / Transcription elongation factor S-II proteinAT5G11430 (1.30E-83)
PH01002970G0210-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000163SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
nucleus,
RNA-directed RNA polymerase activity,
zinc ion binding,
histone_binding
histone-lysine N-methyltransferase activity,
details
CFinderM000323Diterpenoid_biosynthesis
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
electron carrier activity,
heme binding,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,
iron ion binding,
histone_lysine_methylation
histone_binding
histone-lysine N-methyltransferase activity,
oxidation-reduction process,
details
CFinderM001014SET Transcription_Regulator(from iTAK)
endoplasmic reticulum,
nucleus,
ubiquitin ligase complex,
histone_methylation
details
CFinderM001357bHLH Transcription_Regulator(from PlantTFDB)
SET Transcription_Regulator(from iTAK)
Lysine_degradation
nucleus,
histone_methylation
histone_lysine_methylation
protein dimerization activity,
details
CFinderM001362Protein_processing_in_endoplasmic_reticulum
mannose biosynthetic process,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
phosphomannomutase activity,
histone_lysine_methylation
details
CFinderM001420heat shock protein binding,
Protein_processing_in_endoplasmic_reticulum
unfolded protein binding,
CAMK_CDPK (from iTAK)
response to heat,
protein folding,
details
CFinderM001488STAT Transcription_Regulator(from PlantTFDB)
TKL-Pl-5 (from iTAK)
Lysine_degradation
nucleus,
chloroplast,
SET Transcription_Regulator(from iTAK)
histone_methylation
mRNA processing,
histone_lysine_methylation
details
CFinderM001705Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
chloroplast,
histone-lysine N-methyltransferase activity,
histone_binding
ubiquitin-dependent protein catabolic process,
details

4.Expression profilings