Gene details

Annotation of co-expression genes

PH01003129G0180's details annotation

1.Annotation

ICBR annotation: DNA-directed RNA polymerase subunit, putative, expressed

Blast result AT3G23780 : 0.00E+00
Blast annotation: nuclear RNA polymerase D2A

2.Location

Scaffold: PH01003129
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000363	Phenylalanine,_tyrosine_and_tryptophan_biosynthesis aromatic amino acid family biosynthetic process, 3-dehydroquinate synthase activity, ribonucleoside_binding transcription, DNA-dependent, DNA-directed RNA polymerase activity,
coexpression network	CFinderM001205	ribonucleoside_binding transcription, DNA-dependent, DNA-directed RNA polymerase activity, Drug_metabolism_-_cytochrome_P450 Metabolism_of_xenobiotics_by_cytochrome_P450 Glutathione_metabolism

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003899	DNA-directed RNA polymerase activity
GO:0006351	transcription, DNA-dependent
GO:0032549	ribonucleoside binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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