Gene details

Annotation of co-expression genes

PH01005790G0030's details annotation

1.Annotation

ICBR annotation: RNA-binding protein-like, putative, expressed

Blast result AT5G60980 : 1.40E-79
Blast annotation: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

2.Location

Scaffold: PH01005790
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000940	nucleic acid binding, Ribosome_biogenesis_in_eukaryotes
coexpression network	CFinderM001282	protein methylation, intracellular, methyltransferase activity, nucleotide binding, nucleic acid binding, IWS1 Transcription_Regulator(from iTAK) ribosome biogenesis, transport,
coexpression network	CFinderM001283	TKL-Pl-4 (from iTAK) intracellular, ribosome biogenesis,
coexpression network	CFinderM001646	Tify Transcription_Regulator(from iTAK) mRNA_catabolic_process polyribonucleotide_nucleotidyltransferase_activity 3'-5'-exoribonuclease activity, RNA processing,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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