CFinderM000287's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
thiamine biosynthetic process,0.000214353GO:0009228
Pyruvate_metabolism0.009678843KEGG
Carbon_fixation_in_photosynthetic_organisms0.009678843KEGG
iron-sulfur cluster binding,0.024339447GO:0051536
Zeatin_biosynthesis0.031755865KEGG
Thiamine_metabolism0.031755865KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000000G6800UDP-glycosyltransferase 73B4AT2G15490 (2.10E-40)
PH01000015G2630Protein of unknown function (DUF3741)AT5G02390 (9.80E-22)
PH01000024G1360syntaxin of plants 71AT3G09740 (2.70E-99)
PH01000160G1060Pentatricopeptide repeat (PPR-like) superfamily proteinAT5G13770 (7.00E-137)
PH01000258G1040-AT4G02920 (4.00E-35)
PH01000265G0010-AT3G52740 (6.90E-21)
PH01000376G0220peroxisomal NAD-malate dehydrogenase 2AT5G09660 (2.00E-160)
PH01000397G0940basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT4G00050 (9.80E-40)
PH01001228G0480alpha/beta-Hydrolases superfamily proteinAT3G48690 (1.30E-60)
PH01001233G0110camphor resistance CrcB family proteinAT2G41705 (3.50E-95)
PH01001584G0150thiaminCAT2G29630 (4.00E-108)
PH01001584G0170thiaminCAT2G29630 (0.00E+00)
PH01001881G0200UDP-Glycosyltransferase superfamily proteinAT2G36780 (2.00E-122)
PH01002045G0110phosphoenolpyruvate carboxylase 1AT1G53310 (0)
PH01002488G0240Uncharacterised protein family (UPF0114)AT4G19390 (4.60E-41)
PH01004369G0010Sucrose-phosphate synthase family proteinAT4G10120 (0)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000063SNARE_interactions_in_vesicular_transport
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
GTnc GlycosylTransferases
RLK-Pelle_LRR-XI-1 (from iTAK)
protein phosphorylation,
details
CFinderM000159chitin binding,
chitin catabolic process,
cell wall macromolecule catabolic process,
chitinase activity,
ATP binding,
ATPase activity,
SNARE_interactions_in_vesicular_transport
carbohydrate metabolic process,
protein phosphorylation,
transport,
transmembrane transport,
RLK-Pelle_LRR-VIII-1 (from iTAK)
RLK-Pelle_LRK10L-2 (from iTAK)
details
CFinderM000160RLK-Pelle_LRK10L-2 (from iTAK)
SNARE_interactions_in_vesicular_transport
transport,
cell wall macromolecule catabolic process,
chitin catabolic process,
transmembrane transport,
details
CFinderM000277Valine,_leucine_and_isoleucine_biosynthesis
Alanine,_aspartate_and_glutamate_metabolism
SNARE_interactions_in_vesicular_transport
fructose-bisphosphate aldolase activity,
glycolysis,
details
CFinderM000695STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM000698RLK-Pelle_L-LEC (from iTAK)
cellular aldehyde metabolic process,
Caffeine_metabolism
Valine,_leucine_and_isoleucine_degradation
Lysine_degradation
Chloroalkane_and_chloroalkene_degradation
beta-Alanine_metabolism
SNARE_interactions_in_vesicular_transport
Limonene_and_pinene_degradation
Histidine_metabolism
Propanoate_metabolism
Tryptophan_metabolism
Drug_metabolism_-_other_enzymes
details
CFinderM000811RLK-Pelle_CrRLK1L-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM000841glutamate biosynthetic process,
glutamate synthase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
2 iron, 2 sulfur cluster binding,
oxidoreductase activity,
bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM000892Valine,_leucine_and_isoleucine_degradation
cellular aldehyde metabolic process,
aldehyde dehydrogenase [NAD(P)+] activity,
details
CFinderM000907SNARE_interactions_in_vesicular_transport
details
CFinderM001050SNARE_interactions_in_vesicular_transport
details
CFinderM001274mitochondrial ribosome,
protein folding,
SNARE_interactions_in_vesicular_transport
PHD Transcription_Regulator(from iTAK)
details
CFinderM001288HB-KNOX Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Amino_sugar_and_nucleotide_sugar_metabolism
Glutathione_metabolism
SNARE_interactions_in_vesicular_transport
Ascorbate_and_aldarate_metabolism
details
CFinderM001562HB-KNOX Transcription_Regulator(from iTAK)
sterol_24-C-methyltransferase_activity
TALE Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
Steroid_biosynthesis
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
details

4.Expression profilings


Show details about module gene expression profiling