Function module details

CFinderM000364's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
GRAS Transcription_Regulator(from PlantTFDB)	0.000310953	GFam
oxygen evolving complex,	0.016974054	GO:0009654
phosphopyruvate hydratase complex,	0.016974054	GO:0000015
extrinsic to membrane,	0.016974054	GO:0019898
photosystem II,	0.017713549	GO:0009523
phosphopyruvate hydratase activity,	0.02495757	GO:0004634
Glycolysis_/_Gluconeogenesis	0.044852921	KEGG
Methane_metabolism	0.044852921	KEGG
RNA_degradation	0.044852921	KEGG

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000002G4340	Photosystem II reaction center PsbP family protein	AT3G05410 (1.60E-81)
PH01000090G0620	Hs1pro-1 protein	AT3G55840 (3.80E-37)
PH01001115G0650	cytosolic enolase	AT2G29560 (2.00E-164)
PH01001245G0190	scarecrow-like 5	AT1G50600 (2.00E-153)
PH01001397G0220	WRKY DNA-binding protein 30	AT5G24110 (3.10E-32)
PH01001709G0280	-	- (-)
PH01002417G0180	GRAS family transcription factor	AT5G48150 (1.00E-142)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000258	cellular protein modification process, protein neddylation, phosphopyruvate hydratase complex, NF-YB Transcription_Regulator(from PlantTFDB) PLATZ Transcription_Regulator(from iTAK) RLK-Pelle_LRR-VI-2 (from iTAK)	details
CFinderM000413	extrinsic to membrane, photosystem II, oxygen evolving complex,	details
CFinderM000612	photosystem II, extrinsic to membrane, oxygen evolving complex, RLK-Pelle_DLSV (from iTAK) ubiquitin ligase complex,	details

4.Expression profilings