CFinderM000851's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_GSK (from iTAK)0.003931966GFam
regulation_of_DNA-templated_transcription,_elongation0.021856546GO:0032784

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000966G0440GSK3/SHAGGY-like protein kinase 1AT1G06390 (0.00E+00)
PH01001798G0220plastid transcriptionally active 13AT3G09210 (1.20E-17)
PH01002065G0310-- (-)
PH01002278G0200hydrolase family protein / HAD-superfamily proteinAT3G45740 (6.60E-34)
PH01003720G0120ATP binding cassette subfamily B4AT2G47000 (4.00E-161)
PH01005121G0010ARM repeat superfamily proteinAT5G18980 (4.90E-57)
PH01005610G0050DNA photolyases;DNA photolyasesAT4G25290 (1.60E-60)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000231NAD biosynthetic process,
nucleotide-excision repair,
protein folding,
histone_lysine_methylation
details
CFinderM001553seryl-tRNA aminoacylation,
serine-tRNA ligase activity,
Regulation_of_autophagy
tRNA aminoacylation for protein translation,
ribonuclease activity,
Aminoacyl-tRNA_biosynthesis
details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples0123456leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000966G0440PH01001798G0220PH01002065G0310PH01002278G0200PH01003720G0120PH01005121G0010PH01005610G0050Highcharts.com