CFinderM001038's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,7.05E-10GO:0003871
methionine biosynthetic process,2.56E-09GO:0009086
Selenocompound_metabolism4.70E-08KEGG
cellular amino acid biosynthetic process,1.50E-07GO:0008652
Cysteine_and_methionine_metabolism1.20E-06KEGG
methylenetetrahydrofolate reductase (NADPH) activity,0.001546972GO:0004489
methionine metabolic process,0.001562598GO:0006555
zinc ion binding,0.002163537GO:0008270
One_carbon_pool_by_folate0.009364603KEGG
Carbon_fixation_pathways_in_prokaryotes0.010916836KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000059G1620-AT3G03210 (8.50E-38)
PH01000122G1010methylenetetrahydrofolate reductase 2AT2G44160 (0.00E+00)
PH01000561G0150-AT1G21370 (3.00E-126)
PH01000955G0570Cobalamin-independent synthase family proteinAT5G17920 (0.00E+00)
PH01000971G0240Cobalamin-independent synthase family proteinAT5G17920 (0.00E+00)
PH01001165G0440Cobalamin-independent synthase family proteinAT5G17920 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM0005515-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,
methionine biosynthetic process,
Selenocompound_metabolism
cellular amino acid biosynthetic process,
Cysteine_and_methionine_metabolism
zinc ion binding,
details
CFinderM000827RLK-Pelle_RLCK-VIIb (from iTAK)
RLK-Pelle_LRR-III (from iTAK)
microtubule,
protein complex,
Selenocompound_metabolism
apoplast,
methionine biosynthetic process,
cellular amino acid biosynthetic process,
microtubule-based process,
protein polymerization,
lignin catabolic process,
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,
Phagosome
Cysteine_and_methionine_metabolism
details
CFinderM001006GT43 GlycosylTransferases
Phagosome
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
details
CFinderM0013445-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,
methionine biosynthetic process,
Selenocompound_metabolism
cysteine-type endopeptidase activity,
cellular amino acid biosynthetic process,
Cysteine_and_methionine_metabolism
proton transport,
proteolysis,
hydrogen-translocating pyrophosphatase activity,
inorganic diphosphatase activity,
details

4.Expression profilings