CFinderM001456's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis0.000375053KEGG
L-phenylalanine biosynthetic process,0.005622275GO:0009094
microtubule associated complex,0.018055548GO:0005875
microtubule-based movement,0.025697309GO:0007018
prephenate dehydratase activity,0.027549148GO:0004664

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000056G1870P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT5G47820 (0.00E+00)
PH01000461G0470receptor like protein 4AT1G28340 (0.00E+00)
PH01000669G0010RNA-binding protein-defense related 1AT4G03110 (3.00E-106)
PH01001010G0030arogenate dehydratase 2AT3G07630 (3.00E-108)
PH01001424G0190pentatricopeptide (PPR) repeat-containing proteinAT2G22070 (6.00E-143)
PH01071576G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000372Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
regulation of ARF GTPase activity,
Endocytosis
details
CFinderM001037RLK-Pelle_LRR-VI-1 (from iTAK)
microtubule associated complex,
regulation of ARF protein signal transduction,
details
CFinderM001255GT77 GlycosylTransferases
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
succinate-CoA ligase (ADP-forming) activity,
ATP citrate synthase activity,
Carbon_fixation_pathways_in_prokaryotes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
prephenate dehydratase activity,
Citrate_cycle_(TCA_cycle)
details
CFinderM001697Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
cellular carbohydrate metabolic process,
peptide-methionine-(S)-S-oxide reductase activity,
prephenate dehydratase activity,
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
Carbon_fixation_pathways_in_prokaryotes
cofactor binding,
Citrate_cycle_(TCA_cycle)
details

4.Expression profilings