CFinderM001548's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein methyltransferase activity,0.012484637GO:0008276
proton-transporting ATP synthase complex, catalytic core F(1),0.0144091GO:0045261
clathrin adaptor complex,0.0144091GO:0030131
proton-transporting ATPase activity, rotational mechanism,0.014954899GO:0046961
O-methyltransferase activity,0.014954899GO:0008171
hydrogen ion transporting ATP synthase activity, rotational mechanism,0.014954899GO:0046933
protein methylation,0.042400031GO:0006479
ATP synthesis coupled proton transport,0.043573498GO:0015986

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000133G0280Clathrin adaptor complexes medium subunit family proteinAT1G56590 (1.00E-114)
PH01000154G0130-- (-)
PH01000183G0950RNA methyltransferase family proteinAT5G64150 (8.00E-33)
PH01000888G0440S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT3G62000 (4.50E-87)
PH01001182G0430Coatomer, beta subunitAT3G15980 (6.60E-35)
PH01002586G0010PDI-like 5-4AT4G27080 (2.00E-121)
PH01004232G0040gamma subunit of Mt ATP synthaseAT2G33040 (2.60E-71)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000121proton-transporting ATP synthase complex, catalytic core F(1),
ATP synthesis coupled proton transport,
Terpenoid_backbone_biosynthesis
hydrogen ion transporting ATP synthase activity, rotational mechanism,
transferase activity, transferring alkyl or aryl (other than methyl) groups,
proton-transporting ATPase activity, rotational mechanism,
details
CFinderM001161malic enzyme activity,
malate_dehydrogenase_(decarboxylating)_(NAD+)_activity
malate metabolic process,
details
CFinderM001264cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001319protein methyltransferase activity,
urease activity,
nickel cation binding,
dephosphorylation,
nitrogen compound metabolic process,
protein methylation,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
RNA processing,
protein dephosphorylation,
Arginine_and_proline_metabolism
phosphatase activity,
Purine_metabolism
details
CFinderM001604GT31 GlycosylTransferases
Nucleotide_excision_repair
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
DNA metabolic process,
G-protein coupled receptor signaling pathway,
nuclease activity,
endoplasmic reticulum,
details

4.Expression profilings