CFinderM001604's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GT31 GlycosylTransferases0.003371257GFam
Nucleotide_excision_repair0.01212936KEGG
guanyl nucleotide binding,0.024703128GO:0019001
G-protein_beta/gamma-subunit_complex_binding0.024703128GO:0031683
DNA metabolic process,0.028846094GO:0006259
G-protein coupled receptor signaling pathway,0.028846094GO:0007186
nuclease activity,0.036565783GO:0004518
endoplasmic reticulum,0.039171861GO:0005783

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000600G0470extra-large G-protein 1AT2G23460 (0)
PH01000784G0170Galactosyltransferase family proteinAT5G53340 (3.00E-118)
PH01001182G0430Coatomer, beta subunitAT3G15980 (6.60E-35)
PH01003480G0100nucleotide sugar transporter-KT 1AT4G39390 (5.00E-121)
PH01004142G0010calreticulin 1aAT1G56340 (4.40E-30)
PH01006328G0050Restriction endonuclease, type II-like superfamily proteinAT5G41150 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001189GT31 GlycosylTransferases
RNA processing,
protein glycosylation,
Fructose_and_mannose_metabolism
mRNA_surveillance_pathway
Amino_sugar_and_nucleotide_sugar_metabolism
galactosyltransferase activity,
transferase activity,
details
CFinderM001368Protein_processing_in_endoplasmic_reticulum
cell redox homeostasis,
endoplasmic reticulum,
details
CFinderM001479GT31 GlycosylTransferases
CAMK_CDPK (from iTAK)
protein glycosylation,
details
CFinderM001486endoplasmic reticulum,
protein folding,
Protein_processing_in_endoplasmic_reticulum
unfolded protein binding,
HSF Transcription_Regulator(from PlantTFDB)
calcium ion binding,
Phagosome
details
CFinderM001503methyltransferase activity,
DNA metabolic process,
nuclease activity,
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
cell redox homeostasis,
Nucleotide_excision_repair
details
CFinderM001504Amino_sugar_and_nucleotide_sugar_metabolism
GT8 GlycosylTransferases
DNA metabolic process,
cellular metabolic process,
Nucleotide_excision_repair
Starch_and_sucrose_metabolism
details
CFinderM001548protein methyltransferase activity,
proton-transporting ATP synthase complex, catalytic core F(1),
clathrin adaptor complex,
proton-transporting ATPase activity, rotational mechanism,
O-methyltransferase activity,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
protein methylation,
ATP synthesis coupled proton transport,
details
CFinderM001768regulation of Rab GTPase activity,
Rab GTPase activator activity,
intracellular,
Nucleotide_excision_repair
G-protein coupled receptor signaling pathway,
DNA metabolic process,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
nuclease activity,
details
CFinderM001774regulation of Rab GTPase activity,
Rab GTPase activator activity,
intracellular,
DNA metabolic process,
isoprenoid biosynthetic process,
nuclease activity,
Nucleotide_excision_repair
Terpenoid_backbone_biosynthesis
details

4.Expression profilings