|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GT31 GlycosylTransferases | 0.003371257 | GFam | | RNA processing, | 0.02097673 | GO:0006396 | | protein glycosylation, | 0.02097673 | GO:0006486 | | Fructose_and_mannose_metabolism | 0.040202223 | KEGG | | mRNA_surveillance_pathway | 0.040202223 | KEGG | | Amino_sugar_and_nucleotide_sugar_metabolism | 0.040202223 | KEGG | | galactosyltransferase activity, | 0.046669612 | GO:0008378 | | transferase activity, | 0.046669612 | GO:0016740 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000106G1460 | ADP-glucose pyrophosphorylase family protein | AT1G74910 (8.90E-76) | | PH01000661G0110 | - | - (-) | | PH01000784G0170 | Galactosyltransferase family protein | AT5G53340 (3.00E-118) | | PH01001504G0060 | Calcium-binding EF-hand family protein | AT5G28850 (0.00E+00) | | PH01004300G0100 | subunit of exocyst complex 8 | AT3G10380 (5.60E-77) | | PH01162872G0010 | crooked neck protein, putative / cell cycle protein, putative | AT5G41770 (2.00E-106) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000283 | serine-type peptidase activity,
| details | | CFinderM000716 | Golgi apparatus,
clathrin adaptor complex,
membrane coat,
chromatin binding,
| details | | CFinderM001066 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
vesicle docking,
ATP metabolic process,
ATP_catabolic_process
ATP biosynthetic process,
proton transport,
exocytosis,
| details | | CFinderM001319 | protein methyltransferase activity,
urease activity,
nickel cation binding,
dephosphorylation,
nitrogen compound metabolic process,
protein methylation,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
RNA processing,
protein dephosphorylation,
Arginine_and_proline_metabolism
phosphatase activity,
Purine_metabolism
| details | | CFinderM001398 | cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
| details | | CFinderM001479 | GT31 GlycosylTransferases
CAMK_CDPK (from iTAK)
protein glycosylation,
| details | | CFinderM001604 | GT31 GlycosylTransferases
Nucleotide_excision_repair
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
DNA metabolic process,
G-protein coupled receptor signaling pathway,
nuclease activity,
endoplasmic reticulum,
| details | | CFinderM001714 | phosphatidylinositol_dephosphorylation
Ribosome_biogenesis_in_eukaryotes
RNA processing,
| details | | CFinderM001775 | myosin complex,
TBP-class_protein_binding
Fructose_and_mannose_metabolism
Basal_transcription_factors
Amino_sugar_and_nucleotide_sugar_metabolism
motor activity,
| details |
4.Expression profilings |
