CFinderM001775's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
myosin complex,0.004679741GO:0016459
TBP-class_protein_binding0.017014029GO:0017025
Fructose_and_mannose_metabolism0.028757466KEGG
Basal_transcription_factors0.028757466KEGG
Amino_sugar_and_nucleotide_sugar_metabolism0.034794528KEGG
motor activity,0.042468648GO:0003774

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000106G1460ADP-glucose pyrophosphorylase family proteinAT1G74910 (8.90E-76)
PH01001580G0280myosin XI BAT1G04160 (0.00E+00)
PH01001914G0250BTB-POZ and MATH domain 2AT3G06190 (4.70E-82)
PH01002557G0220oligouridylate binding protein 1BAT1G17370 (2.00E-158)
PH01002983G0240Ubiquitin-like superfamily proteinAT4G01000 (3.90E-22)
PH01003003G0040plant-specific TFIIB-related proteinAT4G36650 (3.60E-46)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001189GT31 GlycosylTransferases
RNA processing,
protein glycosylation,
Fructose_and_mannose_metabolism
mRNA_surveillance_pathway
Amino_sugar_and_nucleotide_sugar_metabolism
galactosyltransferase activity,
transferase activity,
details
CFinderM001290Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
details
CFinderM001311Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
serine-type peptidase activity,
CAMK_CDPK (from iTAK)
histone modification,
phospholipid biosynthetic process,
aromatic amino acid family biosynthetic process,
phosphatidylserine decarboxylase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
details
CFinderM001351GH100 Glycoside_Hydrolases
Protein_export
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type peptidase activity,
details
CFinderM001485HSF Transcription_Regulator(from PlantTFDB)
myosin complex,
tRNA aminoacylation for protein translation,
details
CFinderM001647phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
details
CFinderM001742GT31 GlycosylTransferases
Basal_transcription_factors
fatty-acyl-CoA binding,
TBP-class_protein_binding
ubiquitin-dependent protein catabolic process,
protein glycosylation,
galactosyltransferase activity,
ubiquitin thiolesterase activity,
details
CFinderM001894AGC_NDR (from iTAK)
Golgi apparatus,
membrane coat,
clathrin adaptor complex,
nucleic acid binding,
details

4.Expression profilings