CFinderADM000389 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription factor: RWP-RK | 0.019130141 | gene family |
| membrane | 0.032820685 | GO:0016020 |
| homogalacturonan biosynthesis | 0.009774057 | plantCyc |
| Oxidative_phosphorylation | 0.047259828 | KEGG |
| Valine,_leucine_and_isoleucine_degradation | 0.047259828 | KEGG |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.036358685 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g009260.1 | Protein of unknown function (DUF3049) | AT5G22090 (5.00E-41) |
| Solyc01g100210.2 | galacturonosyltransferase 5 | AT1G02720 (6.00E-129) |
| Solyc02g079760.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | AT1G61660 (2.00E-48) |
| Solyc04g077010.2 | Leucine-rich repeat transmembrane protein kinase family protein | AT5G49660 (0) |
| Solyc05g006990.2 | nitrate transporter 1:2 | AT1G69850 (0) |
| Solyc06g073560.2 | isovaleryl-CoA-dehydrogenase | AT3G45300 (0) |
| Solyc07g017780.2 | H(+)-ATPase 1 | AT2G18960 (0) |
| Solyc08g005580.2 | ATP-binding cassette 14 | AT1G31770 (0) |
| Solyc08g008410.2 | NIN like protein 7 | AT4G24020 (0) |
| Solyc08g082130.2 | ||
| Solyc12g088760.1 | Subtilisin-like serine endopeptidase family protein | AT5G67090 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000190 | Transcription factor: G2-like 1,3-beta-D-glucan synthase complex extracellular space | details |
| CFinderADM000279 | apoplast cell wall acyl-CoA dehydrogenase activity oxidoreductase activity, acting on the CH-CH group of donors homogalacturonan biosynthesis Plant_hormone_signal_transduction Valine,_leucine_and_isoleucine_degradation formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000539 | Transcription factor: MIKC nucleus protein dimerization activity sequence-specific DNA binding transcription factor activity regulation of transcription, DNA-dependent DNA binding iron reduction and absorption | details |
| CFinderADM000745 | Transcription factor: RWP-RK oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water ATP binding nucleobase-containing compound kinase activity PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Ribosome_biogenesis_in_eukaryotes adenosine ribonucleotides de novo biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |