CFinderADM000576 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| respiratory electron transport chain | 1.91E-06 | GO:0022904 |
| mitochondrial inner membrane | 2.64E-05 | GO:0005743 |
| oxidoreductase activity, acting on NADH or NADPH | 3.39E-05 | GO:0016651 |
| endocytosis | 0.002216274 | GO:0006897 |
| ER to Golgi vesicle-mediated transport | 0.006272395 | GO:0006888 |
| cis-Golgi network | 0.009228892 | GO:0005801 |
| aerobic respiration III (alternative oxidase pathway) | 0.000893269 | plantCyc |
| NAD/NADH phosphorylation and dephosphorylation | 0.000893269 | plantCyc |
| aerobic respiration I (cytochrome c) | 0.000912764 | plantCyc |
| Non-alcoholic_fatty_liver_disease_(NAFLD) | 0.000388665 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g090500.2 | ||
| Solyc02g086840.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G27960 (0) |
| Solyc03g007660.2 | NADH-ubiquinone oxidoreductase-related | AT5G52840 (9.00E-70) |
| Solyc03g117580.2 | AT1G16000 (2.00E-27) | |
| Solyc06g036350.2 | NADH-ubiquinone oxidoreductase-related | AT5G52840 (1.00E-68) |
| Solyc06g068030.2 | SNARE-like superfamily protein | AT1G80500 (1.00E-68) |
| Solyc09g066490.2 | non-intrinsic ABC protein 4 | AT1G03900 (9.00E-88) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000658 | large ribosomal subunit proteasome core complex proteolysis involved in cellular protein catabolic process nucleoside metabolic process threonine-type endopeptidase activity PRPP biosynthesis I Purine_metabolism Proteasome | details |
| CFinderADM000684 | ATP-dependent peptidase activity Rho guanyl-nucleotide exchange factor activity ornithine biosynthesis Arginine_biosynthesis | details |
| CFinderADM000720 | Transcription factor: TCP | details |
| CFinderADM000789 | protein_prenylation protein prenyltransferase activity Terpenoid_backbone_biosynthesis | details |
| CFinderADM000878 | transcription, DNA-dependent spliceosomal complex nuclear mRNA splicing, via spliceosome | details |
| CFinderADM000991 | racemase and epimerase activity, acting on carbohydrates and derivatives galactosyltransferase activity protein glycosylation Pentose_phosphate_pathway Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin Carbon_fixation_in_photosynthetic_organisms formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001067 | transcription, DNA-dependent protein_peptidyl-prolyl_isomerization | details |
| CFinderADM001094 | translational termination purine nucleotide biosynthetic process adenylosuccinate synthase activity protein domain specific binding translation release factor activity, codon specific cytoplasm Retrograde_endocannabinoid_signaling Alanine,_aspartate_and_glutamate_metabolism | details |
| CFinderADM001115 | protein glycosylation galactosyltransferase activity Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001184 | cellular amino acid metabolic process homoserine biosynthesis flavonol biosynthesis syringetin biosynthesis Monobactam_biosynthesis Flavonoid_biosynthesis Flavonoid_biosynthesis | details |
| CFinderADM001214 | respiratory electron transport chain mitochondrial inner membrane oxidoreductase activity, acting on NADH or NADPH protein ubiquitination Non-alcoholic_fatty_liver_disease_(NAFLD) | details |
| CFinderADM001243 | tetrahydrofolate_biosynthetic_process PPC:4.5.3: Casein Kinase II Family GTP_cyclohydrolase_I_activity protein glycosylation galactosyltransferase activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II syringetin biosynthesis flavonol biosynthesis Folate_biosynthesis Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin Flavonoid_biosynthesis Flavonoid_biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001266 | ATP-dependent peptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |