CFinderADM000720 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| Transcription factor: TCP | 0.007433524 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g008230.2 | TCP family transcription factor | AT5G23280 (3.00E-57) |
| Solyc02g070570.2 | Ribosomal protein S11 family protein | AT3G11510 (4.00E-64) |
| Solyc02g086840.2 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G27960 (0) |
| Solyc03g031720.2 | RNA-binding (RRM/RBD/RNP motifs) family protein | AT1G11650 (6.00E-124) |
| Solyc03g078400.2 | actin 7 | AT5G09810 (0) |
| Solyc06g071720.1 | Ribosomal protein L18e/L15 superfamily protein | AT1G70600 (3.00E-67) |
| Solyc11g005330.1 | actin 7 | AT5G09810 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000367 | ribosome translation structural constituent of ribosome intracellular nucleobase-containing compound kinase activity nucleobase-containing compound metabolic process Ribosome_biogenesis_in_eukaryotes adenosine ribonucleotides de novo biosynthesis | details |
| CFinderADM000576 | respiratory electron transport chain mitochondrial inner membrane oxidoreductase activity, acting on NADH or NADPH endocytosis ER to Golgi vesicle-mediated transport cis-Golgi network aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation aerobic respiration I (cytochrome c) Non-alcoholic_fatty_liver_disease_(NAFLD) | details |
| CFinderADM000658 | large ribosomal subunit proteasome core complex proteolysis involved in cellular protein catabolic process nucleoside metabolic process threonine-type endopeptidase activity PRPP biosynthesis I Purine_metabolism Proteasome | details |
| CFinderADM000684 | ATP-dependent peptidase activity Rho guanyl-nucleotide exchange factor activity ornithine biosynthesis Arginine_biosynthesis | details |
| CFinderADM000789 | protein_prenylation protein prenyltransferase activity Terpenoid_backbone_biosynthesis | details |
| CFinderADM000878 | transcription, DNA-dependent spliceosomal complex nuclear mRNA splicing, via spliceosome | details |
| CFinderADM000991 | racemase and epimerase activity, acting on carbohydrates and derivatives galactosyltransferase activity protein glycosylation Pentose_phosphate_pathway Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin Carbon_fixation_in_photosynthetic_organisms formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001067 | transcription, DNA-dependent protein_peptidyl-prolyl_isomerization | details |
| CFinderADM001094 | translational termination purine nucleotide biosynthetic process adenylosuccinate synthase activity protein domain specific binding translation release factor activity, codon specific cytoplasm Retrograde_endocannabinoid_signaling Alanine,_aspartate_and_glutamate_metabolism | details |
| CFinderADM001115 | protein glycosylation galactosyltransferase activity Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001184 | cellular amino acid metabolic process homoserine biosynthesis flavonol biosynthesis syringetin biosynthesis Monobactam_biosynthesis Flavonoid_biosynthesis Flavonoid_biosynthesis | details |
| CFinderADM001243 | tetrahydrofolate_biosynthetic_process PPC:4.5.3: Casein Kinase II Family GTP_cyclohydrolase_I_activity protein glycosylation galactosyltransferase activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II syringetin biosynthesis flavonol biosynthesis Folate_biosynthesis Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin Flavonoid_biosynthesis Flavonoid_biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001266 | ATP-dependent peptidase activity | details |
| CFinderADM001339 | details |
Expression profiles
 Show details about module gene expression profiling |