CFinderADM000666 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein-arginine_deiminase_activity | 0.000345468 | GO:0004668 |
| putrescine biosynthetic process | 0.001036404 | GO:0009446 |
| defense response | 0.016251851 | GO:0006952 |
| putrescine biosynthesis II | 0.002243764 | plantCyc |
| Arginine_and_proline_metabolism | 0.018048519 | KEGG |
| Drug_metabolism_-_other_enzymes | 0.018048519 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc04g049090.2 | Seven transmembrane MLO family protein | AT1G61560 (2.00E-168) |
| Solyc08g066770.2 | Ankyrin repeat family protein | AT1G10340 (4.00E-80) |
| Solyc09g014820.2 | Protein of unknown function (DUF567) | AT5G01750 (1.00E-60) |
| Solyc09g014860.2 | Protein of unknown function (DUF567) | AT5G01750 (1.00E-60) |
| Solyc11g045460.1 | alpha/beta-Hydrolases superfamily protein | AT5G06570 (5.00E-56) |
| Solyc12g038970.1 | porphyromonas-type peptidyl-arginine deiminase family protein | AT5G08170 (3.00E-166) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000519 | defense response mannitol biosynthesis gluconeogenesis I Peroxisome Carbon_fixation_in_photosynthetic_organisms | details |
| CFinderADM000528 | PPC:1.12.5: Leucine Rich Repeat Kinase X cyanate metabolic process putrescine biosynthetic process isocitrate metabolic process protein-arginine_deiminase_activity isocitrate dehydrogenase (NADP+) activity cyanate degradation putrescine biosynthesis II glutamine biosynthesis III Nitrogen_metabolism | details |
| CFinderADM000922 | putrescine biosynthetic process protein-arginine_deiminase_activity Transcription regulator: HB putrescine biosynthesis II cellulose biosynthesis Starch_and_sucrose_metabolism Arginine_and_proline_metabolism adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM000995 | N-acetyltransferase_activity protein-arginine_deiminase_activity putrescine biosynthetic process Transcription regulator: GNAT metal ion transmembrane transporter activity metal ion transport L-Nδ-acetylornithine biosynthesis putrescine biosynthesis II Arginine_and_proline_metabolism | details |
| CFinderADM000996 | putrescine biosynthetic process protein-arginine_deiminase_activity metal ion transmembrane transporter activity enzyme inhibitor activity putrescine biosynthesis II Arginine_and_proline_metabolism | details |
| CFinderADM000998 | cyanate metabolic process putrescine biosynthetic process protein-arginine_deiminase_activity Transcription factor: TCP Transcription factor: B3 transmembrane_transporter_activity cyanate degradation putrescine biosynthesis II Nitrogen_metabolism Arginine_and_proline_metabolism | details |
| CFinderADM001002 | putrescine biosynthetic process cell redox homeostasis electron carrier activity protein-arginine_deiminase_activity protein disulfide oxidoreductase activity PPC:2.1.2: Ankyrin Repeat Domain Kinase thioredoxin pathway putrescine biosynthesis II Selenocompound_metabolism Arginine_and_proline_metabolism | details |
| CFinderADM001017 | protein-arginine_deiminase_activity phosphatidylethanolamine_binding putrescine biosynthetic process regulation_of_flower_development photoperiodism,_flowering putrescine biosynthesis II Chlorocyclohexane_and_chlorobenzene_degradation Arginine_and_proline_metabolism | details |
| CFinderADM001027 | cyanate metabolic process defense response lipid metabolic process cyanate degradation Nitrogen_metabolism Peroxisome | details |
| CFinderADM001064 | cyanate metabolic process Transcription factor: TCP lipid metabolic process cyanate degradation Nitrogen_metabolism Peroxisome | details |
| CFinderADM001100 | putrescine biosynthetic process protein-arginine_deiminase_activity nucleosome assembly nucleosome cell redox homeostasis putrescine biosynthesis II thioredoxin pathway Arginine_and_proline_metabolism Selenocompound_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |