TissueCFM000293 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| kinetochore_assembly | 0.001662349 | GO:0051382 |
| meiotic chromosome segregation | 0.001662349 | GO:0045132 |
| centromeric DNA binding | 0.002216657 | GO:0019237 |
| kinetochore | 0.005034811 | GO:0000776 |
| transcription factor complex | 0.005034811 | GO:0005667 |
| chromosome, centromeric region | 0.005034811 | GO:0000775 |
| Transcription_related, Transcription factor: E2F-DP | 0.005437596 | gene family |
| Transcription_related, Transcription factor: MYB | 0.041816888 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g068260.2 | transcription coactivators | AT1G77320 (0) |
| Solyc01g103570.2 | DNA-binding bromodomain-containing protein | AT1G58025 (2.00E-68) |
| Solyc02g087310.2 | DP-E2F-like protein 3 | AT3G01330 (3.00E-75) |
| Solyc03g120340.2 | centromere protein C | |
| Solyc08g076020.2 | plastid transcriptionally active 17 | AT1G80480 (1.00E-115) |
| Solyc08g080580.2 | Homeodomain-like protein | AT4G32730 (2.00E-67) |
| Solyc11g008090.1 | Shugoshin C terminus |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000282 | meiotic chromosome segregation kinetochore_assembly centromeric DNA binding kinetochore chromosome, centromeric region protein binding | details |
| TissueCFM000378 | MCM_complex DNA-dependent DNA replication initiation DNA replication Transcription_related, Transcription regulator: ARID Viral carcinogenesis | details |
| TissueCFM000411 | kinetochore kinetochore_assembly centromeric DNA binding Ubiquitin_Proteasome_system, E3 adaptor: DWD EGFR tyrosine kinase inhibitor resistance | details |
| TissueCFM000691 | ATP-dependent DNA helicase activity ATP binding DNA binding kinesin complex hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides chromatin binding microtubule-based movement Ubiquitin_Proteasome_system, E3: RING Transcription_related, Transcription regulator: PHD Transcription_related, Transcription regulator: SNF2 Viral carcinogenesis | details |
| TissueCFM000736 | chromosome, centromeric region meiotic chromosome segregation DNA-(apurinic or apyrimidinic site) lyase activity hydrolase activity, hydrolyzing N-glycosyl compounds nucleotide-excision repair base-excision repair damaged DNA binding protein binding Transcription_related, Transcription regulator: SNF2 Base excision repair | details |
| TissueCFM000740 | centromeric DNA binding kinetochore_assembly kinetochore Smc5-Smc6_complex nucleic acid binding Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
Expression profiles
 Show details about module gene expression profiling |