TissueCFM000804 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| TCA cycle II (plants and fungi) | 0.048817852 | plantCyc |
| triacylglycerol biosynthesis | 0.048817852 | plantCyc |
| TCA cycle variation V (plant) | 0.048817852 | plantCyc |
| Choline metabolism in cancer | 0.017006398 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g088570.2 | mitochondrial acyl carrier protein 1 | AT2G44620 (1.00E-44) |
| Solyc01g097020.2 | ||
| Solyc03g051970.2 | Phosphatidic acid phosphatase (PAP2) family protein | AT3G58490 (2.00E-152) |
| Solyc03g097010.2 | NADH-ubiquinone oxidoreductase-related | AT3G03070 (2.00E-38) |
| Solyc05g013910.2 | ||
| Solyc08g080240.2 | Cox19-like CHCH family protein | AT5G18800 (2.00E-43) |
| Solyc12g088360.1 | ARM repeat superfamily protein | AT3G01400 (2.00E-124) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000722 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity pteridine-containing compound metabolic process proteasome core complex, alpha-subunit complex large ribosomal subunit proteasome core complex folic acid-containing compound biosynthetic process endopeptidase activity threonine-type endopeptidase activity proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process tetrahydrofolate biosynthesis 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II Proteasome Folate biosynthesis | details |
| TissueCFM000857 | phospholipid binding methylglyoxal degradation I Pyruvate metabolism Non-alcoholic fatty liver disease (NAFLD) | details |
| TissueCFM001079 | Protein_kinases_phosphatases, PPC:4.5.7: Unknown Function Kinase Ubiquitin_Proteasome_system, E3: U-box triacylglycerol biosynthesis | details |
| TissueCFM001136 | DNA replication | details |
| TissueCFM001182 | proteolysis involved in cellular protein catabolic process proteasome core complex threonine-type endopeptidase activity proteasome core complex, alpha-subunit complex endopeptidase activity ubiquitin-dependent protein catabolic process calmodulin binding Proteasome Alzheimer's disease | details |
| TissueCFM001229 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity pteridine-containing compound metabolic process proteasome core complex, alpha-subunit complex proteasome core complex endopeptidase activity folic acid-containing compound biosynthetic process threonine-type endopeptidase activity mitochondrion double-stranded DNA binding proteolysis involved in cellular protein catabolic process Transcription_related, Transcription factor: mTERF tetrahydrofolate biosynthesis 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II triacylglycerol biosynthesis Proteasome Folate biosynthesis Choline metabolism in cancer | details |
Expression profiles
 Show details about module gene expression profiling |