TissueCFM001507 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| cellular amino acid metabolic process | 0.009059006 | GO:0006520 |
| lyase activity | 0.025395859 | GO:0016829 |
| fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) | 0.003955695 | plantCyc |
| phenylalanine biosynthesis (cytosolic, plants) | 0.003955695 | plantCyc |
| unsaturated, even numbered fatty acid β-oxidation | 0.003955695 | plantCyc |
| Bile secretion | 0.001582642 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc05g015710.2 | AT1G27290 (7.00E-29) | |
| Solyc06g053670.1 | 3-hydroxyacyl-CoA dehydratase 1 | AT4G14430 (1.00E-74) |
| Solyc06g064640.2 | alpha/beta-Hydrolases superfamily protein | AT4G10030 (4.00E-135) |
| Solyc07g055660.2 | glycine-rich protein | |
| Solyc10g008200.2 | Tyrosine transaminase family protein | AT5G36160 (8.00E-139) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000228 | Transcription_related, Transcription factor: VOZ Ubiquitin_Proteasome_system, E3: RING Bile secretion | details |
| TissueCFM000266 | cellular amino acid metabolic process lyase activity zinc ion binding Ubiquitin_Proteasome_system, E3: RING Transcription_related, Transcription factor: BES1 phenylalanine biosynthesis (cytosolic, plants) | details |
| TissueCFM001037 | protein kinase C-activating G-protein coupled receptor signaling pathway steroid biosynthetic process diacylglycerol kinase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity kinase activity Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase UDP-L-arabinose biosynthesis I (from UDP-xylose) UDP-sugars interconversion phosphatidate metabolism, as a signaling molecule Bile secretion | details |
| TissueCFM001114 | ceramide metabolic process mediator complex integral to membrane hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides cellular amino acid metabolic process regulation of transcription from RNA polymerase II promoter defense response RNA_polymerase_II_transcription_cofactor_activity lyase activity phenylalanine biosynthesis (cytosolic, plants) | details |
| TissueCFM001164 | folic acid binding FMN adenylyltransferase activity riboflavin biosynthetic process transferase activity flavin biosynthesis I (bacteria and plants) folate transformations II Riboflavin metabolism One carbon pool by folate Bile secretion | details |
| TissueCFM001273 | Ubiquinone and other terpenoid-quinone biosynthesis | details |
| TissueCFM001386 | homogentisate 1,2-dioxygenase activity L-phenylalanine catabolic process tyrosine metabolic process ubiquitin-protein ligase activity protein ubiquitination Styrene degradation Bile secretion | details |
| TissueCFM001418 | O-acyltransferase_activity Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) unsaturated, even numbered fatty acid β-oxidation phospholipases phosphatidylcholine acyl editing Regulation of lipolysis in adipocyte Hippo signaling pathway -fly | details |
| TissueCFM001419 | cellular amino acid metabolic process phenylalanine biosynthesis (cytosolic, plants) phospholipases Thyroid hormone signaling pathway Bile secretion Indole alkaloid biosynthesis | details |
| TissueCFM001481 | cellular amino acid metabolic process oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor phenylalanine biosynthesis (cytosolic, plants) sucrose biosynthesis I (from photosynthesis) glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) gluconeogenesis I Ubiquinone and other terpenoid-quinone biosynthesis Alzheimer's disease | details |
Expression profiles
 Show details about module gene expression profiling |