TreatCFM000228 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| cis-Golgi network | 0.006594343 | GO:0005801 |
| Golgi membrane | 0.006594343 | GO:0000139 |
| ER to Golgi vesicle-mediated transport | 0.007335171 | GO:0006888 |
| transmembrane_transporter_activity | 0.013887082 | GO:0022857 |
| integral to membrane | 0.017079053 | GO:0016021 |
| signal transduction | 0.029990462 | GO:0007165 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g091020.2 | golgi snare 12 | AT2G45200 (5.00E-114) |
| Solyc01g100920.2 | nodulin MtN21 /EamA-like transporter family protein | AT1G09380 (1.00E-97) |
| Solyc02g093700.2 | PQ-loop repeat family protein / transmembrane family protein | AT5G40670 (4.00E-99) |
| Solyc06g068450.1 | CBL-interacting protein kinase 25 | AT5G25110 (3.00E-159) |
| Solyc11g069330.1 | AT3G53400 (3.00E-93) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000229 | mannose-6-phosphate isomerase activity carbohydrate metabolic process GDP-mannose_biosynthetic_process cis-Golgi network Golgi membrane ER to Golgi vesicle-mediated transport cellular glucan metabolic process apoplast xyloglucan:xyloglucosyl transferase activity D-mannose degradation mannitol biosynthesis GDP-mannose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) Plant hormone signal transduction Biofilm formation - Pseudomonas aeruginosa hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
| TreatCFM001012 | Golgi membrane cis-Golgi network ER to Golgi vesicle-mediated transport Transcription_related, Transcription factor: ERF | details |
| TreatCFM001513 | protein domain specific binding glycopeptide_alpha-N-acetylgalactosaminidase_activity cis-Golgi network Golgi membrane ER to Golgi vesicle-mediated transport integral to membrane Starch and sucrose metabolism hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | details |
Expression profiles
 Show details about module gene expression profiling |