TreatCFM001167 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| protein-phycocyanobilin_linkage | 0.003838201 | GO:0017009 |
| γ-glutamyl cycle | 0.005065404 | plantCyc |
| L-ascorbate degradation V | 0.006960019 | plantCyc |
| ascorbate glutathione cycle | 0.009690123 | plantCyc |
| Glutathione metabolism | 0.000169638 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g104170.2 | ankyrin repeat-containing 2B | AT2G17390 (2.00E-105) |
| Solyc01g104190.2 | maternal effect embryo arrest 9 | |
| Solyc01g111510.2 | ascorbate peroxidase 3 | AT4G35000 (2.00E-128) |
| Solyc02g091600.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT2G16030 (8.00E-49) |
| Solyc03g097230.1 | AIG2-like (avirulence induced gene) family protein | AT3G02910 (2.00E-58) |
| Solyc04g006930.2 | proline-rich extensin-like receptor kinase 10 | AT1G26150 (4.00E-149) |
| Solyc06g068760.2 | crumpled leaf | AT5G51020 (4.00E-103) |
| Solyc07g063430.2 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | AT1G52870 (1.00E-134) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000643 | mRNA_cleavage_factor_complex mRNA_polyadenylation mRNA_binding γ-glutamyl cycle Peroxisome purine deoxyribonucleosides salvage adenosine ribonucleotides de novo biosynthesis | details |
| TreatCFM000708 | Ubiquitin_Proteasome_system, E2: UBC ascorbate glutathione cycle L-ascorbate degradation V Glutathione metabolism | details |
| TreatCFM000795 | mRNA_cleavage_factor_complex mRNA_polyadenylation mRNA_binding protein serine/threonine kinase activity Peroxisome | details |
| TreatCFM000914 | tocopherol_cyclase_activity Cytochrome_P450, Cytochrome P450: CYP89A indole-3-acetate activation I vitamin E biosynthesis (tocotrienols) L-ascorbate degradation V hydroxyjasmonate sulfate biosynthesis vitamin E biosynthesis (tocotrienols) ascorbate glutathione cycle Ubiquinone and other terpenoid-quinone biosynthesis Glutathione metabolism Toluene degradation | details |
| TreatCFM001142 | methyltransferase activity γ-glutamyl cycle Glutathione metabolism | details |
| TreatCFM001534 | hydroxymethyl-, formyl- and related transferase activity small GTPase mediated signal transduction biosynthetic process GTP binding 5-aminoimidazole ribonucleotide biosynthesis I tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Antifolate resistance | details |
| TreatCFM001564 | protein-phycocyanobilin_linkage UDP-D-xylose biosynthesis | details |
| TreatCFM001570 | integral to membrane transmembrane transport cation transmembrane transporter activity cation transport GTP binding | details |
| TreatCFM001628 | protein-phycocyanobilin_linkage chlorophyll a degradation I chlorophyll a degradation II | details |
Expression profiles
 Show details about module gene expression profiling |