TreatCFM001221 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| inositol pentakisphosphate 2-kinase activity | 0.008448324 | GO:0035299 |
| ATP-dependent 3'-5' DNA helicase activity | 0.008448324 | GO:0043140 |
| Ubiquitin_Proteasome_system, E3: U-box | 0.049387251 | gene family |
| inositol pyrophosphates biosynthesis | 0.016717934 | plantCyc |
| 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) | 0.016717934 | plantCyc |
| lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) | 0.016717934 | plantCyc |
| lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) | 0.016717934 | plantCyc |
| 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) | 0.016717934 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g056620.2 | double-stranded-RNA-binding protein 4 | AT3G62800 (6.00E-36) |
| Solyc01g087370.2 | PHD finger family protein | AT3G08020 (2.00E-31) |
| Solyc01g087400.2 | RING/FYVE/PHD-type zinc finger family protein | |
| Solyc01g104310.2 | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein | AT1G33270 (3.00E-134) |
| Solyc04g005500.2 | Plant protein of unknown function (DUF863) | AT1G69360 (4.00E-72) |
| Solyc04g080670.2 | inositol-pentakisphosphate 2-kinase 1 | AT5G42810 (4.00E-113) |
| Solyc07g040940.2 | U-box domain-containing protein kinase family protein | AT5G57035 (0) |
| Solyc08g080210.2 | nuclear RNA polymerase D1A | AT1G63020 (0) |
| Solyc09g018690.2 | RECQ helicase L4B |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000389 | electron-transferring-flavoprotein dehydrogenase activity magnesium_ion_transport Cytochrome_P450, Cytochrome P450: CYP89A valine degradation I poly-hydroxy fatty acids biosynthesis beta-Alanine metabolism MicroRNAs in cancer | details |
| TreatCFM000394 | amino_acid_transmembrane_transport amino acid transmembrane transporter activity Transcription_related, Transcription factor: B3 formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM000891 | Ubiquitin_Proteasome_system, E3 adaptor: DWD Phenylalanine metabolism | details |
| TreatCFM001501 | electron-transferring-flavoprotein dehydrogenase activity peptidyl-prolyl cis-trans isomerase activity protein_peptidyl-prolyl_isomerization protein folding vesicle-mediated transport Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM001612 | Cytochrome_P450, Cytochrome P450: CYP89A Ubiquitin_Proteasome_system, E3 adaptor: DWD poly-hydroxy fatty acids biosynthesis Hippo signaling pathway -fly | details |
Expression profiles
 Show details about module gene expression profiling |