TreatCFM001618 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ion transport | 0.008188224 | GO:0006811 |
| amino_acid_transmembrane_transport | 0.008188224 | GO:0003333 |
| amino acid transmembrane transporter activity | 0.009920626 | GO:0015171 |
| transporter activity | 0.044804719 | GO:0005215 |
| Vitamin digestion and absorption | 0.016589072 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g104480.2 | ||
| Solyc02g070290.2 | cation-chloride co-transporter 1 | AT1G30450 (0) |
| Solyc02g081580.2 | NC domain-containing protein-related | AT3G02700 (2.00E-84) |
| Solyc03g095470.2 | AT2G40800 (2.00E-111) | |
| Solyc10g078790.1 | AT5G57460 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001146 | Transcription_related, Transcription factor: GeBP Herpes simplex infection | details |
| TreatCFM001317 | small protein activating enzyme activity tRNA aminoacylation tRNA binding aminoacyl-tRNA ligase activity Ubiquitin_Proteasome_system, E1: ThiF tRNA charging Aminoacyl-tRNA biosynthesis Vitamin digestion and absorption | details |
| TreatCFM001548 | nucleolus four-way junction helicase activity ion channel activity membrane ribosome biogenesis DNA recombination ion transport Synaptic vesicle cycle | details |
| TreatCFM001581 | proteasome core complex threonine-type endopeptidase activity proteolysis involved in cellular protein catabolic process proton-transporting ATP synthase complex assembly endopeptidase activity proteasome core complex, alpha-subunit complex ubiquitin-dependent protein catabolic process Proteasome | details |
| TreatCFM001648 | Golgi_transport_complex RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |