Gene details

Annotation of co-expression genes

PH01000019G1740's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT5G41190 : 3.00E-147
Blast annotation: -

2.Location

Scaffold: PH01000019
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000940	nucleic acid binding, Ribosome_biogenesis_in_eukaryotes
coexpression network	CFinderM001079	SOS_response DNA metabolic process, cellular protein metabolic process,
coexpression network	CFinderM001718	phosphoribosyl-AMP cyclohydrolase activity, histidine biosynthetic process, RNA modification, pseudouridine synthesis, nuclear pore,
coexpression network	CFinderM001719	nuclear pore, RNA modification, pseudouridine synthesis, pseudouridine synthase activity, Ribosome_biogenesis_in_eukaryotes RNA_transport

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome biogenesis in eukaryotes	RNA-binding protein NOB1	ko03008	K11883

10.Gene Ontology

GO Accession	GO Annotation
null	null

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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