PH01002314G0160's details annotation 1.Annotation ICBR annotation: polynucleotide phosphorylase, putative, expressed
Blast result AT3G03710 : 1.40E-48 Blast annotation: polyribonucleotide nucleotidyltransferase, putative 2.Location Scaffold: PH01002314 Strand: + Region | Start | End | gene | 104149 | 106520 | mRNA | 104149 | 106520 | exon | 104149 | 104324 | exon | 104500 | 104573 | exon | 104663 | 104770 | exon | 105059 | 105160 | exon | 105377 | 105430 | exon | 105516 | 105557 | exon | 105987 | 106520 | CDS | 104312 | 104324 | CDS | 104500 | 104573 | CDS | 104663 | 104770 | CDS | 105059 | 105160 | CDS | 105377 | 105430 | CDS | 105516 | 105557 | CDS | 105987 | 106193 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000626 | mRNA_catabolic_process polyribonucleotide_nucleotidyltransferase_activity CMGC_MAPK (from iTAK) 3'-5'-exoribonuclease activity, RNA binding, RNA processing, Purine_metabolism RNA_degradation Pyrimidine_metabolism
| coexpression network | CFinderM000901 | mRNA_catabolic_process polyribonucleotide_nucleotidyltransferase_activity RNA binding, 3'-5'-exoribonuclease activity, CE8 Carbohydrate_Esterases cell wall, cell wall modification, pectinesterase activity, RNA processing,
| coexpression network | CFinderM001306 | mRNA_catabolic_process polyribonucleotide_nucleotidyltransferase_activity CE8 Carbohydrate_Esterases RNA binding, conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA methionyl-tRNA formyltransferase activity, 3'-5'-exoribonuclease activity, hydroxymethyl-, formyl- and related transferase activity,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003723 | RNA binding | GO:0004654 | polyribonucleotide nucleotidyltransferase activity | GO:0006402 | mRNA catabolic process |
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