Gene details

Annotation of co-expression genes

PH01002541G0130's details annotation

1.Annotation

ICBR annotation: peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed

Blast result AT4G25340 : 1.30E-19
Blast annotation: FK506 BINDING PROTEIN 53

2.Location

Scaffold: PH01002541
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001129	nucleus, double-strand break repair, DNA metabolic process, RNA_polymerase Pyrimidine_metabolism Purine_metabolism
coexpression network	CFinderM001473	GPI anchor metabolic process, DNA recombination, RNA_degradation
coexpression network	CFinderM001492	mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, nucleolus, Ubiquitin_mediated_proteolysis ribosome biogenesis,
coexpression network	CFinderM001636	GPI anchor metabolic process, double-strand break repair, protein folding, nucleus, DNA metabolic process, exonuclease activity, endonuclease activity, phosphoprotein phosphatase activity, manganese ion binding, peptidyl-prolyl cis-trans isomerase activity,
coexpression network	CFinderM001855	Base_excision_repair GPI anchor metabolic process, DNA recombination,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00254.27	FKBP_C	393	466

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0006457	protein folding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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