CFinderM001492's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
mitochondrial inner membrane,0.006866302GO:0005743
mitochondrial inner membrane presequence translocase complex,0.006866302GO:0005744
nucleolus,0.006866302GO:0005730
Ubiquitin_mediated_proteolysis0.025238006KEGG
ribosome biogenesis,0.029847416GO:0042254

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000110G0590S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT1G16650 (1.20E-67)
PH01000155G0370Haloacid dehalogenase-like hydrolase (HAD) superfamily proteinAT1G55900 (8.50E-53)
PH01000274G0530ubiquiting-conjugating enzyme 2AT2G02760 (2.50E-82)
PH01000426G0150pescadillo-relatedAT5G14520 (0.00E+00)
PH01000750G0240ubiquitin-protein ligasesAT2G39810 (4.80E-92)
PH01002541G0130FK506 BINDING PROTEIN 53AT4G25340 (1.30E-19)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000495SNF2 Transcription_Regulator(from iTAK)
proteasomal ubiquitin-dependent protein catabolic process,
nucleotide-excision repair,
ribosome biogenesis,
eukaryotic translation initiation factor 3 complex,
nucleolus,
helicase activity,
details
CFinderM000646ion transport,
Ubiquitin_mediated_proteolysis
membrane,
details
CFinderM000671SET Transcription_Regulator(from iTAK)
DNA repair,
Base_excision_repair
nuclease activity,
Ubiquitin_mediated_proteolysis
details
CFinderM000954defense response,
ADP_binding
acid phosphatase activity,
Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
details
CFinderM001129nucleus,
double-strand break repair,
DNA metabolic process,
RNA_polymerase
Pyrimidine_metabolism
Purine_metabolism
details
CFinderM001444nucleolus,
SNARE_interactions_in_vesicular_transport
Homologous_recombination
SOS_response
DNA metabolic process,
ribosome biogenesis,
single-stranded DNA binding,
DNA-dependent ATPase activity,
details
CFinderM001473GPI anchor metabolic process,
DNA recombination,
RNA_degradation
details
CFinderM001522SNF2 Transcription_Regulator(from iTAK)
nucleolus,
nuclear pore,
RNA_transport
details
CFinderM001527PHD Transcription_Regulator(from iTAK)
guanyl-nucleotide exchange factor activity,
details
CFinderM001580iron-sulfur cluster assembly,
RNA processing,
details
CFinderM001636GPI anchor metabolic process,
double-strand break repair,
protein folding,
nucleus,
DNA metabolic process,
exonuclease activity,
endonuclease activity,
phosphoprotein phosphatase activity,
manganese ion binding,
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM001702ribosome biogenesis,
nucleolus,
eukaryotic translation initiation factor 3 complex,
RNA_transport
details
CFinderM001732details
CFinderM001803spliceosomal complex,
mitosis,
Spliceosome
protein dephosphorylation,
details
CFinderM001810mitosis,
spliceosomal complex,
Spliceosome
details
CFinderM001839GPI anchor metabolic process,
DNA methylation,
DNA recombination,
Base_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001855Base_excision_repair
GPI anchor metabolic process,
DNA recombination,
details
CFinderM001869DNA recombination,
(1->3)-beta-D-glucan biosynthetic process,
1,3-beta-D-glucan synthase complex,
Ubiquitin_mediated_proteolysis
details

4.Expression profilings