Gene details

Annotation of co-expression genes

PH01000750G0240's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT2G39810 : 4.80E-92
Blast annotation: ubiquitin-protein ligases

2.Location

Scaffold: PH01000750
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001492	mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, nucleolus, Ubiquitin_mediated_proteolysis ribosome biogenesis,
coexpression network	CFinderM001522	SNF2 Transcription_Regulator(from iTAK) nucleolus, nuclear pore, RNA_transport
coexpression network	CFinderM001527	PHD Transcription_Regulator(from iTAK) guanyl-nucleotide exchange factor activity,
coexpression network	CFinderM001580	iron-sulfur cluster assembly, RNA processing,
coexpression network	CFinderM001702	ribosome biogenesis, nucleolus, eukaryotic translation initiation factor 3 complex, RNA_transport
coexpression network	CFinderM001732
coexpression network	CFinderM001803	spliceosomal complex, mitosis, Spliceosome protein dephosphorylation,
coexpression network	CFinderM001810	mitosis, spliceosomal complex, Spliceosome

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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