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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Ribosome | 0.000653255 | KEGG | | translation, | 0.000777352 | GO:0006412 | | structural constituent of ribosome, | 0.001064973 | GO:0003735 | | proton-transporting ATP synthase complex assembly, | 0.002083431 | GO:0043461 | | intracellular, | 0.002533438 | GO:0005622 | | signal peptidase complex, | 0.004858681 | GO:0005787 | | signal peptide processing, | 0.006938695 | GO:0006465 | | mRNA processing, | 0.010396664 | GO:0006397 | | Ribosome | 0.020086851 | KEGG | | peptidase activity, | 0.034169281 | GO:0008233 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000068G0080 | ATP12 protein-related | AT5G40660 (4.80E-95) | | PH01000070G1530 | Ribosomal protein S16 family protein | AT5G56940 (1.40E-31) | | PH01000328G0430 | Microsomal signal peptidase 25 kDa subunit (SPC25) | AT2G39960 (4.00E-70) | | PH01000411G0240 | RNA binding (RRM/RBD/RNP motifs) family protein | AT3G12640 (5.40E-57) | | PH01000681G0040 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | AT2G32060 (1.60E-47) | | PH01001030G0380 | Ribosomal L29 family protein | AT5G02610 (1.20E-39) | | PH01001418G0300 | GYF domain-containing protein | AT1G24300 (2.70E-96) | | PH01003332G0190 | SIN3 associated polypeptide P18 | AT2G45640 (4.80E-37) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000599 | mRNA_cis_splicing,_via_spliceosome
nuclear_cap_binding_complex
RNA_cap_binding
hydro-lyase activity,
fatty acid biosynthetic process,
Biotin_metabolism
Fatty_acid_biosynthesis
| details |
4.Expression profilings |
