CFinderM000314's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
6-phosphofructokinase complex,0.006483263GO:0005945
heme biosynthetic process,0.012495117GO:0006783
ferrochelatase activity,0.027170926GO:0004325
RLK-Pelle_DLSV (from iTAK)0.028154547GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000062G2000-- (-)
PH01000620G0480ferrochelatase 2AT2G30390 (6.10E-26)
PH01001001G0630S-locus lectin protein kinase family proteinAT4G03230 (2.60E-53)
PH01001548G0080P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT1G80350 (0.00E+00)
PH01003395G0080-AT1G30240 (1.20E-18)
PH01004956G0070-- (-)
PH01007983G0020-- (-)
PH01066591G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000781spliceosomal complex,
GPI anchor metabolic process,
mitosis,
Spliceosome
details
CFinderM0011766-phosphofructokinase complex,
amino acid binding,
6-phosphofructokinase activity,
glycolysis,
details
CFinderM001177MED6 Transcription_Regulator(from iTAK)
mediator complex,
regulation of transcription from RNA polymerase II promoter,
metabolic process,
Ether_lipid_metabolism
Glycerophospholipid_metabolism
Endocytosis
details
CFinderM001366sulfur compound metabolic process,
endoplasmic reticulum,
phosphatidylinositol phosphorylation,
3'(2'),5'-bisphosphate nucleotidase activity,
RLK-Pelle_DLSV (from iTAK)
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
Sulfur_metabolism
details
CFinderM001555protein retention in ER lumen,
RLK-Pelle_DLSV (from iTAK)
ER retention sequence binding,
details
CFinderM001559GT22 GlycosylTransferases
intrinsic to endoplasmic reticulum membrane,
GPI anchor metabolic process,
GPI anchor biosynthetic process,
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001732details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples012345leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000062G2000PH01000620G0480PH01001001G0630PH01001548G0080PH01003395G0080PH01004956G0070PH01007983G0020PH01066591G0010Highcharts.com