CFinderM000379's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
arginyl-tRNA aminoacylation,0.003609375GO:0006420
arginine-tRNA ligase activity,0.01426875GO:0004814
tRNA processing,0.016205679GO:0008033
tRNA (guanine-N2-)-methyltransferase activity,0.016640632GO:0004809
tRNA aminoacylation for protein translation,0.027501199GO:0006418
double-stranded RNA binding,0.044287732GO:0003725

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000566G0540RNI-like superfamily proteinAT3G58530 (3.00E-121)
PH01000871G0650Drug/metabolite transporter superfamily proteinAT2G25520 (6.00E-134)
PH01000954G0320N2,N2-dimethylguanosine tRNA methyltransferaseAT5G15810 (4.00E-31)
PH01001963G0340-- (-)
PH01001963G0360-- (-)
PH01002792G0200Arginyl-tRNA synthetase, class IcAT4G26300 (0.00E+00)
PH01162987G0010polymerase gamma 2AT1G50840 (2.80E-85)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000193L-methionine salvage from methylthioadenosine,
arginyl-tRNA aminoacylation,
7-methylguanosine mRNA capping,
arginine-tRNA ligase activity,
mRNA_(guanine-N7-)-methyltransferase_activity
acireductone_dioxygenase_[iron(II)-requiring]_activity
double-stranded RNA binding,
tRNA aminoacylation for protein translation,
details
CFinderM000389protein folding,
response to heat,
unfolded protein binding,
details
CFinderM001638tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples012345leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000566G0540PH01000871G0650PH01000954G0320PH01001963G0340PH01001963G0360PH01002792G0200PH01162987G0010Highcharts.com