CFinderM000478's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
HB-HD-ZIP Transcription_Regulator(from iTAK)0.000205992GFam
HD-ZIP Transcription_Regulator(from PlantTFDB)0.000205992GFam
AGC_RSK-2 (from iTAK)0.011885982GFam
COPII vesicle coat,0.020596656GO:0030127
nucleus,0.039555327GO:0005634

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000014G2500homeodomain GLABROUS 11AT1G73360 (0.00E+00)
PH01000024G1180-- (-)
PH01000029G2300Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinAT3G43720 (1.10E-23)
PH01000183G0480Protein kinase superfamily proteinAT2G34650 (6.70E-45)
PH01000299G0810Ubiquitin carboxyl-terminal hydrolase-related proteinAT3G47910 (0.00E+00)
PH01000517G0290homeodomain GLABROUS 11AT1G73360 (0.00E+00)
PH01000688G0200sec23/sec24 transport family proteinAT2G27460 (0.00E+00)
PH01000840G0290Immunoglobulin E-set superfamily proteinAT3G07880 (1.40E-71)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000056HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_biosynthesis
nucleus,
transition metal ion binding,
acyl-[acyl-carrier-protein] desaturase activity,
fatty acid metabolic process,
lipid biosynthetic process,
sequence-specific DNA binding,
DNA binding,
sequence-specific DNA binding transcription factor activity,
fatty acid biosynthetic process,
YABBY Transcription_Regulator(from PlantTFDB)
C2C2-YABBY Transcription_Regulator(from iTAK)
lipase activity,
Rho GDP-dissociation inhibitor activity,
details
CFinderM000070HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
Rho GDP-dissociation inhibitor activity,
1-phosphatidylinositol-4-phosphate 5-kinase activity,
phosphatidylinositol metabolic process,
sequence-specific DNA binding,
transcription_regulatory_region_sequence-specific_DNA_binding
sequence-specific DNA binding transcription factor activity,
phosphatidylinositol phosphate kinase activity,
regulation of transcription, DNA-dependent,
nucleus,
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
Endocytosis
details
CFinderM000308ubiquitin-dependent protein catabolic process,
ubiquitin thiolesterase activity,
details
CFinderM000878Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
Phagosome
details
CFinderM001012clathrin_coat
clathrin_coat_assembly
clathrin_binding
1-phosphatidylinositol_binding
WRKY Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings