|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GH35 Glycoside_Hydrolases | 0.010795019 | GFam | | Jumonji Transcription_Regulator(from iTAK) | 0.010795019 | GFam | | Valine,_leucine_and_isoleucine_biosynthesis | 0.020134769 | KEGG | | Glycosphingolipid_biosynthesis_-_ganglio_series | 0.025156664 | KEGG | | Other_glycan_degradation | 0.030154999 | KEGG | | Glycosaminoglycan_degradation | 0.030154999 | KEGG | | ketol-acid reductoisomerase activity, | 0.031273799 | GO:0004455 | | coproporphyrinogen oxidase activity, | 0.031273799 | GO:0004109 | | beta-galactosidase activity, | 0.031273799 | GO:0004565 | | Sphingolipid_metabolism | 0.048157649 | KEGG | | Pantothenate_and_CoA_biosynthesis | 0.048454231 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000145G1320 | RING/FYVE/PHD zinc finger superfamily protein | AT1G50440 (7.40E-90) | | PH01000181G1340 | nuclear encoded CLP protease 5 | AT1G02560 (2.00E-110) | | PH01000254G0340 | ketol-acid reductoisomerase | AT3G58610 (0.00E+00) | | PH01000313G1220 | transducin family protein / WD-40 repeat family protein | AT5G08560 (0.00E+00) | | PH01000502G0600 | beta-galactosidase 17 | AT1G72990 (3.00E-161) | | PH01000742G0240 | phospholipases;galactolipases | AT1G61850 (0.00E+00) | | PH01000809G0320 | Radical SAM superfamily protein | AT5G63290 (7.00E-152) | | PH01001584G0340 | ubiquitin-protein ligase 7 | AT3G53090 (0.00E+00) | | PH01002173G0310 | alpha-N-acetylglucosaminidase family / NAGLU family | AT5G13690 (1.60E-64) | | PH01002603G0080 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | AT5G19750 (7.70E-64) | | PH01002855G0150 | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase | AT1G09060 (8.00E-180) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000535 | GT37 GlycosylTransferases
CMGC_MAPK (from iTAK)
| details | | CFinderM000548 | superoxide dismutase activity,
superoxide metabolic process,
Peroxisome
Aminoacyl-tRNA_biosynthesis
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
| details | | CFinderM000680 | protein arginylation,
mitochondrial matrix,
arginyltransferase activity,
RNA methyltransferase activity,
RNA processing,
| details | | CFinderM000928 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
Aminoacyl-tRNA_biosynthesis
Jumonji Transcription_Regulator(from iTAK)
translation,
| details | | CFinderM001122 | cis-Golgi network,
translational initiation,
RNA_transport
| details | | CFinderM001151 | Aminoacyl-tRNA_biosynthesis
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
Jumonji Transcription_Regulator(from iTAK)
translation,
| details | | CFinderM001326 | Jumonji Transcription_Regulator(from iTAK)
cytoplasm,
integral to membrane,
coproporphyrinogen oxidase activity,
porphyrin-containing compound biosynthetic process,
phospholipid transport,
Peroxisome
Porphyrin_and_chlorophyll_metabolism
| details | | CFinderM001688 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
CMGC_MAPK (from iTAK)
| details | | CFinderM001690 | GT37 GlycosylTransferases
cell wall biogenesis,
proteolysis,
protein catabolic process,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
galactoside 2-alpha-L-fucosyltransferase activity,
mRNA_surveillance_pathway
| details |
4.Expression profilings |
