CFinderM000535's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GT37 GlycosylTransferases0.010109984GFam
CMGC_MAPK (from iTAK)0.023452653GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000181G1340nuclear encoded CLP protease 5AT1G02560 (2.00E-110)
PH01000183G0200DEGP protease 5AT4G18370 (9.90E-69)
PH01000185G0390UDP-Glycosyltransferase superfamily proteinAT2G40190 (2.00E-177)
PH01000299G0560-AT3G52220 (4.90E-61)
PH01000306G0300alpha/beta-Hydrolases superfamily proteinAT1G13820 (1.20E-75)
PH01000383G0480MAP kinase 4AT4G01370 (0.00E+00)
PH01000437G0420fucosyltransferase 1AT2G03220 (3.00E-177)
PH01000454G1000cullin 1AT4G02570 (0.00E+00)
PH01000466G1030type one serine/threonine protein phosphatase 4AT2G39840 (3.00E-154)
PH01000489G0450Adaptin family proteinAT1G31730 (0.00E+00)
PH01001214G0050LRR and NB-ARC domains-containing disease resistance proteinAT3G14460 (1.70E-49)
PH01001222G0560Alba DNA/RNA-binding proteinAT1G20220 (2.30E-36)
PH01001233G0190-- (-)
PH01001238G0220TOPLESS-related 1AT1G80490 (0.00E+00)
PH01001679G0360Transducin/WD40 repeat-like superfamily proteinAT3G13300 (0.00E+00)
PH01002727G0070D-3-phosphoglycerate dehydrogenaseAT4G34200 (1.00E-170)
PH01003375G0030Plant protein of unknown function (DUF641)AT2G45260 (6.00E-157)
PH01005442G0070Sec23/Sec24 protein transport family proteinAT3G07100 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000154GT37 GlycosylTransferases
cell wall biogenesis,
cell death,
protein catabolic process,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
galactoside 2-alpha-L-fucosyltransferase activity,
integral to membrane,
membrane,
mRNA_surveillance_pathway
details
CFinderM000185integral to membrane,
details
CFinderM000503details
CFinderM000548superoxide dismutase activity,
superoxide metabolic process,
Peroxisome
Aminoacyl-tRNA_biosynthesis
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
details
CFinderM000566cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
peroxisome organization,
integral_component_of_peroxisomal_membrane
PHD Transcription_Regulator(from iTAK)
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM000711GH35 Glycoside_Hydrolases
Jumonji Transcription_Regulator(from iTAK)
Valine,_leucine_and_isoleucine_biosynthesis
Glycosphingolipid_biosynthesis_-_ganglio_series
Other_glycan_degradation
Glycosaminoglycan_degradation
ketol-acid reductoisomerase activity,
coproporphyrinogen oxidase activity,
beta-galactosidase activity,
Sphingolipid_metabolism
Pantothenate_and_CoA_biosynthesis
details
CFinderM000862DBP Transcription_Regulator(from iTAK)
Golgi stack,
GPI-anchor transamidase complex,
details
CFinderM000928carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
Aminoacyl-tRNA_biosynthesis
Jumonji Transcription_Regulator(from iTAK)
translation,
details
CFinderM001137RLK-Pelle_LRR-Xa (from iTAK)
coproporphyrinogen oxidase activity,
porphyrin-containing compound biosynthetic process,
Porphyrin_and_chlorophyll_metabolism
Terpenoid_backbone_biosynthesis
isoprenoid biosynthetic process,
mRNA_surveillance_pathway
details
CFinderM001151Aminoacyl-tRNA_biosynthesis
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
Jumonji Transcription_Regulator(from iTAK)
translation,
details
CFinderM001258proteasome complex,
regulation of protein catabolic process,
enzyme regulator activity,
Proteasome
RNA_degradation
details
CFinderM001403CMGC_DYRK-PRP4 (from iTAK)
integral to membrane,
details
CFinderM001404integral to membrane,
CMGC_DYRK-PRP4 (from iTAK)
details
CFinderM001442GT37 GlycosylTransferases
RLK-Pelle_LRR-Xa (from iTAK)
cell wall biogenesis,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
galactoside 2-alpha-L-fucosyltransferase activity,
details
CFinderM001620GT37 GlycosylTransferases
cell wall biogenesis,
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
AMP deaminase activity,
deaminase activity,
galactoside 2-alpha-L-fucosyltransferase activity,
N-acetyltransferase_activity
details
CFinderM001688CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
CMGC_MAPK (from iTAK)
details
CFinderM001690GT37 GlycosylTransferases
cell wall biogenesis,
proteolysis,
protein catabolic process,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
galactoside 2-alpha-L-fucosyltransferase activity,
mRNA_surveillance_pathway
details
CFinderM001725cellular protein metabolic process,
MYB Transcription_Regulator(from PlantTFDB)
details
CFinderM001738GT37 GlycosylTransferases
galactoside 2-alpha-L-fucosyltransferase activity,
cell wall biogenesis,
cell death,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
membrane coat,
mRNA_surveillance_pathway
details
CFinderM001853peroxisome organization,
integral_component_of_peroxisomal_membrane
cullin-RING ubiquitin ligase complex,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001859protein catabolic process,
details

4.Expression profilings


Show details about module gene expression profiling