CFinderM001009's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000084G1030RING/FYVE/PHD zinc finger superfamily proteinAT1G79350 (3.00E-117)
PH01000458G0730Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G16280 (1.00E-151)
PH01000738G0280-- (-)
PH01001428G0040ARM repeat superfamily proteinAT5G62600 (5.00E-116)
PH01002227G0250ARG1-like 1AT1G24120 (3.90E-74)
PH01002880G0120ZCW7AT1G59600 (9.00E-51)
PH01004122G0140SKP1-like 21AT3G61415 (1.50E-97)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000572ubiquitin-dependent protein catabolic process,
details
CFinderM000931Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
signal recognition particle,
ubiquitin thiolesterase activity,
ubiquitin-dependent protein catabolic process,
chorismate metabolic process,
aromatic amino acid family biosynthetic process,
SRP-dependent cotranslational protein targeting to membrane,
chorismate mutase activity,
7S RNA binding,
Protein_export
details
CFinderM001015DNA primase activity,
details
CFinderM001203SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
details
CFinderM001248DNA primase activity,
details
CFinderM001615Alanine,_aspartate_and_glutamate_metabolism
Nitrogen_metabolism
1,3-beta-D-glucan synthase activity,
1,3-beta-D-glucan synthase complex,
exocyst,
(1->3)-beta-D-glucan biosynthetic process,
exocytosis,
cellular amino acid metabolic process,
Arginine_and_proline_metabolism
details

4.Expression profilings