CFinderM001163's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CAMK_CDPK (from iTAK)0.009713348GFam
guanyl-nucleotide exchange factor activity,0.028638378GO:0005085

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000652G0600guanyl-nucleotide exchange factors;GTPase binding;GTP bindingAT4G16340 (0.00E+00)
PH01002092G0390Arabidopsis thaliana protein of unknown function (DUF794)AT5G57930 (1.00E-132)
PH01002447G0130genomes uncoupled 1AT2G31400 (0.00E+00)
PH01004976G0010NAD+ transporter 1AT2G47490 (2.00E-108)
PH01006971G0010calcium-dependent protein kinase 21AT4G04720 (1.80E-78)
PH01030125G00102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT1G06620 (2.60E-88)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000506RLK-Pelle_RLCK-VIIa-2 (from iTAK)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001180SNARE_interactions_in_vesicular_transport
cysteamine dioxygenase activity,
SNAP receptor activity,
details
CFinderM001181SNARE_interactions_in_vesicular_transport
CAMK_CDPK (from iTAK)
cysteamine dioxygenase activity,
SNAP receptor activity,
details
CFinderM001371guanyl-nucleotide exchange factor activity,
small GTPase mediated signal transduction,
microtubule associated complex,
binding,
microtubule-based movement,
details
CFinderM001542guanyl-nucleotide exchange factor activity,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
small GTPase mediated signal transduction,
signal transduction,
terpenoid biosynthetic process,
cellular component organization,
Terpenoid_backbone_biosynthesis
actin cytoskeleton organization,
intracellular,
details
CFinderM001713microtubule associated complex,
microtubule-based movement,
microtubule motor activity,
guanyl-nucleotide exchange factor activity,
cellular component organization,
actin cytoskeleton organization,
small GTPase mediated signal transduction,
details
CFinderM001836GT66 GlycosylTransferases
GT96 GlycosylTransferases
oligosaccharyl transferase activity,
protein glycosylation,
details

4.Expression profilings

Created with Highcharts 4.1.6Gene expression profiling among different tissue samples012345leaf_SRR2035212leaf_SRR2035327leaf_SRR4450543_CKleaf_SRR4450545_Dehydrationleaf_SRR4450547_Dehydrationleaf_SRR4450549_Coldleaf_SRR4450551_ColdLeaf-2Leaf_ERR105068Root_1Root_3Root_5Root_ERR105075RhizomeRhizome_ERR105074culm_SRR1187864shoot_SAM_Ashoot_MIN_Cshoot_YNO_Ashoot_YNO_Cshoot_MNO_Ashoot_MNO_Cshoot_SAM_Cshoot_YIN_Ashoot_YIN_Cshoot_MIN_Ashoot_SRR3050072shoot_SRR3056056shoot_SRR3521411Shoot_A2Shoot_B1Shoot_B3Shoot_C2Shoot_D1Shoot_D3Bud_1Bud_3panicle_early_ERR105069panicle_flowering_ERR105071PH01000652G0600PH01002092G0390PH01002447G0130PH01004976G0010PH01006971G0010PH01030125G0010Highcharts.com