CFinderM001644's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ER_membrane_protein_complex0.001124807GO:0072546
RNA_degradation0.020270217KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000003G3570catalyticsAT5G11560 (0.00E+00)
PH01000040G2100defective in exine formation protein (DEX1)AT3G09090 (0.00E+00)
PH01000093G1780-- (-)
PH01000394G0380Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G35430 (6.00E-122)
PH01000697G0130S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT1G66680 (4.30E-84)
PH01002865G0070-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000219TKL-Pl-6 (from iTAK)
potassium_ion_transmembrane_transport
bZIP Transcription_Regulator(from PlantTFDB)
GH36 Glycoside_Hydrolases
potassium ion transmembrane transporter activity,
details
CFinderM000330GT96 GlycosylTransferases
ER_membrane_protein_complex
details
CFinderM000333protein arginylation,
RNA_polymerase_complex
arginyltransferase activity,
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
details
CFinderM000360protein arginylation,
arginyltransferase activity,
RNA_degradation
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
details
CFinderM000520ER_membrane_protein_complex
GT96 GlycosylTransferases
TKL-Pl-4 (from iTAK)
details
CFinderM000802bZIP Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CDK8 (from iTAK)
RNA_degradation
Plant_hormone_signal_transduction
regulation of transcription, DNA-dependent,
sequence-specific DNA binding,
details
CFinderM000990MBF1 Transcription_Regulator(from iTAK)
RNA_degradation
details
CFinderM001063CMGC_CDK-CDK8 (from iTAK)
protein arginylation,
arginyltransferase activity,
RNA_degradation
details
CFinderM001235ubiquitin ligase complex,
protein ubiquitination,
binding,
Ubiquitin_mediated_proteolysis
RNA_degradation
details
CFinderM001309Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
details

4.Expression profilings