CFinderM001235's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ubiquitin ligase complex,0.014910961GO:0000151
protein ubiquitination,0.016761733GO:0016567
binding,0.027311146GO:0005488
Ubiquitin_mediated_proteolysis0.037857009KEGG
RNA_degradation0.037857009KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000394G0380Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G35430 (6.00E-122)
PH01000697G0550ubiquitin-conjugating enzyme 23AT2G16920 (0.00E+00)
PH01001004G0380SIT4 phosphatase-associated family proteinAT1G30470 (0.00E+00)
PH01001266G0620-- (-)
PH01002968G0010ABI five binding protein 2AT1G13740 (1.40E-39)
PH01003097G0160Rubber elongation factor protein (REF)AT3G05500 (5.90E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000195pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
Endocytosis
aminopeptidase activity,
details
CFinderM000219TKL-Pl-6 (from iTAK)
potassium_ion_transmembrane_transport
bZIP Transcription_Regulator(from PlantTFDB)
GH36 Glycoside_Hydrolases
potassium ion transmembrane transporter activity,
details
CFinderM000296aspartic-type endopeptidase activity,
proteolysis,
drug transmembrane transport,
drug transmembrane transporter activity,
antiporter activity,
details
CFinderM000324pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
GT8 GlycosylTransferases
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
details
CFinderM000333protein arginylation,
RNA_polymerase_complex
arginyltransferase activity,
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
details
CFinderM000360protein arginylation,
arginyltransferase activity,
RNA_degradation
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
details
CFinderM000520ER_membrane_protein_complex
GT96 GlycosylTransferases
TKL-Pl-4 (from iTAK)
details
CFinderM000802bZIP Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CDK8 (from iTAK)
RNA_degradation
Plant_hormone_signal_transduction
regulation of transcription, DNA-dependent,
sequence-specific DNA binding,
details
CFinderM000937details
CFinderM000990MBF1 Transcription_Regulator(from iTAK)
RNA_degradation
details
CFinderM001028peptide-methionine_(R)-S-oxide_reductase_activity
metallopeptidase activity,
Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
details
CFinderM001063CMGC_CDK-CDK8 (from iTAK)
protein arginylation,
arginyltransferase activity,
RNA_degradation
details
CFinderM001236nicotinate-nucleotide diphosphorylase (carboxylating) activity,
nicotinate phosphoribosyltransferase activity,
NAD biosynthetic process,
Endocytosis
protein ubiquitination,
ubiquitin ligase complex,
details
CFinderM001644ER_membrane_protein_complex
RNA_degradation
details

4.Expression profilings