Function module details

CFinderM001856's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
GPI anchor metabolic process,	0.006186436	GO:0006505
Base_excision_repair	0.008224126	KEGG
nuclease activity,	0.031210464	GO:0004518

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000032G2590	apurinic endonuclease-redox protein	AT2G41460 (1.70E-56)
PH01000038G1400	alpha/beta-Hydrolases superfamily protein	AT4G34310 (0.00E+00)
PH01000231G1040	DNAse I-like superfamily protein	AT5G11350 (6.90E-76)
PH01000464G0270	Lung seven transmembrane receptor family protein	AT5G18520 (6.00E-141)
PH01001046G0420	myosin heavy chain-related	AT2G34730 (1.40E-49)
PH01003376G0110	Bax inhibitor-1 family protein	AT4G15470 (5.10E-83)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000671	SET Transcription_Regulator(from iTAK) DNA repair, Base_excision_repair nuclease activity, Ubiquitin_mediated_proteolysis	details
CFinderM000781	spliceosomal complex, GPI anchor metabolic process, mitosis, Spliceosome	details
CFinderM000904	IWS1 Transcription_Regulator(from iTAK) RLK-Pelle_WAK_LRK10L-1 (from iTAK) Steroid_biosynthesis GPI anchor metabolic process,	details
CFinderM001146	TKL-Pl-2 (from iTAK) chromosome, Homologous_recombination DNA topological change, DNA topoisomerase activity, DNA topoisomerase type I activity,	details
CFinderM001204	Mre11 complex, nucleolus, DNA repair,	details
CFinderM001429	negative_regulation_of_transcription,_DNA-templated FMN binding,	details
CFinderM001473	GPI anchor metabolic process, DNA recombination, RNA_degradation	details
CFinderM001559	GT22 GlycosylTransferases intrinsic to endoplasmic reticulum membrane, GPI anchor metabolic process, GPI anchor biosynthetic process, N-Glycan_biosynthesis Various_types_of_N-glycan_biosynthesis	details
CFinderM001636	GPI anchor metabolic process, double-strand break repair, protein folding, nucleus, DNA metabolic process, exonuclease activity, endonuclease activity, phosphoprotein phosphatase activity, manganese ion binding, peptidyl-prolyl cis-trans isomerase activity,	details
CFinderM001669	CBM49 Carbohydrate-Binding_Modules GH9 Glycoside_Hydrolases phosphatidylinositol_dephosphorylation	details
CFinderM001730	Alanine,_aspartate_and_glutamate_metabolism TKL-Pl-2 (from iTAK) carbamoyl_phosphate_biosynthetic_process glutamine_catabolic_process clathrin_coat clathrin_coat_assembly Pyrimidine_metabolism bZIP Transcription_Regulator(from PlantTFDB)	details
CFinderM001807	GT31 GlycosylTransferases SNF2 Transcription_Regulator(from iTAK)	details
CFinderM001839	GPI anchor metabolic process, DNA methylation, DNA recombination, Base_excision_repair Ubiquitin_mediated_proteolysis	details
CFinderM001855	Base_excision_repair GPI anchor metabolic process, DNA recombination,	details
CFinderM001861	SNARE_interactions_in_vesicular_transport acid-amino acid ligase activity, Ubiquitin_mediated_proteolysis mRNA_surveillance_pathway	details
CFinderM001869	DNA recombination, (1->3)-beta-D-glucan biosynthetic process, 1,3-beta-D-glucan synthase complex, Ubiquitin_mediated_proteolysis	details
CFinderM001888	Alanine,_aspartate_and_glutamate_metabolism carbamoyl_phosphate_biosynthetic_process glutamine_catabolic_process clathrin_coat_assembly clathrin_coat 1-phosphatidylinositol_binding clathrin_binding phospholipid binding, Pyrimidine_metabolism cell redox homeostasis,	details
CFinderM001890	clathrin_coat_assembly clathrin_coat 1-phosphatidylinositol_binding clathrin_binding RNA_degradation regulation of transcription, DNA-dependent, phospholipid binding,	details

4.Expression profilings