CFinderADM000946's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| succinate dehydrogenase (ubiquinone) activity | 5.39E-16 | GO:0008177 |
| tricarboxylic acid cycle | 2.01E-12 | GO:0006099 |
| mitochondrial inner membrane | 2.82E-10 | GO:0005743 |
| electron transport chain | 1.16E-08 | GO:0022900 |
| TCA cycle II (plants and fungi) | 3.42E-08 | plantCyc |
| aerobic respiration I (cytochrome c) | 1.15E-07 | plantCyc |
| aerobic respiration III (alternative oxidase pathway) | 1.15E-07 | plantCyc |
| Carbon metabolism | 1.55E-07 | KEGG pathway |
| flavin adenine dinucleotide binding | 1.16E-05 | GO:0050660 |
| 3 iron, 4 sulfur cluster binding | 4.35E-05 | GO:0051538 |
| ErbB signaling pathway | 4.69E-05 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.15.3: Leucine Rich Repeat Kinase IV | 0.000176862 | kinase family |
| protein phosphorylation | 0.001719975 | GO:0006468 |
| protein serine/threonine kinase activity | 0.001860601 | GO:0004674 |
| 2 iron, 2 sulfur cluster binding | 0.003005702 | GO:0051537 |
| Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | 0.003271043 | kinase family |
| regulation of cellular process | 0.003519161 | GO:0050794 |
| 4 iron, 4 sulfur cluster binding | 0.00395559 | GO:0051539 |
| Transcription_related, Transcription factor: ERF | 0.010166821 | TF family |
| Transcription_related, Transcription factor: GRAS | 0.010166821 | TF family |
| electron carrier activity | 0.011721685 | GO:0009055 |
| kinase activity | 0.040473984 | GO:0016301 |
| phosphorylation | 0.043609262 | GO:0016310 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.049469136 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002300 | - | - |
| CRO_T003235 | AT2G20740 (2.00E-35) | Tetraspanin family protein |
| CRO_T003371 | AT3G08720 (0) | ATPK19|protein kinase 19; ATPK2|PROTEIN KINASE 2; ATS6K2|SERINE/THREONINE PROTEIN KINASE 2 |
| CRO_T006620 | AT5G40650 (3.00E-130) | SDH2-2|succinate dehydrogenase 2-2 |
| CRO_T010894 | AT2G47520 (3.00E-19) | AtERF71|ethylene response factor 71; HRE2|HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 |
| CRO_T011169 | AT5G66760 (1.00E-18) | SDH1-1|succinate dehydrogenase 1-1 |
| CRO_T013948 | AT4G28650 (1.00E-14) | Leucine-rich repeat transmembrane protein kinase family protein |
| CRO_T019589 | AT1G29220 (6.00E-46) | transcriptional regulator family protein |
| CRO_T020939 | AT1G74860 (6.00E-22) | unknown protein |
| CRO_T021308 | AT1G56130 (6.00E-106) | Leucine-rich repeat transmembrane protein kinase |
| CRO_T024960 | AT5G66760 (2.00E-174) | SDH1-1|succinate dehydrogenase 1-1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001221 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) Protein_kinases_phosphatases, PPC:1.15.3: Leucine Rich Repeat Kinase IV adenosine ribonucleotides de novo biosynthesis Transcription_related, Transcription factor: bZIP ATP synthesis coupled proton transport ATP hydrolysis coupled proton transport proton-transporting ATP synthase activity, rotational mechanism protein binding Oxidative phosphorylation kinase activity phosphorylation | details |
| CFinderADM001222 | Protein_kinases_phosphatases, PPC:1.15.3: Leucine Rich Repeat Kinase IV GTPase activator activity positive regulation of GTPase activity Endocytosis Transcription_related, Transcription factor: ERF kinase activity oxidoreductase activity phosphorylation | details |
| CFinderADM002005 | Betalain biosynthesis pullulanase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 3 iron, 4 sulfur cluster binding limit dextrinase activity succinate dehydrogenase (ubiquinone) activity calcium-dependent cysteine-type endopeptidase activity cellular aromatic compound metabolic process ferrous iron binding starch catabolic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc starch biosynthetic process Transcription_related, Transcription regulator: SET TCA cycle II (plants and fungi) tricarboxylic acid cycle aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) 2 iron, 2 sulfur cluster binding 4 iron, 4 sulfur cluster binding dioxygenase activity electron carrier activity carbohydrate binding mitochondrial inner membrane Carbon metabolism proteolysis chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |