CFinderADM001146 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| microtubule-based process | 1.51E-05 | GO:0007017 |
| microtubule | 1.83E-05 | GO:0005874 |
| GTPase activity | 0.000282899 | GO:0003924 |
| Nicotinate_and_nicotinamide_metabolism | 0.030102099 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g071250.2 | SCP1-like small phosphatase 4 | AT5G46410 (4.00E-94) |
| Solyc02g081590.2 | global transcription factor C | |
| Solyc04g081490.2 | tubulin beta-1 chain | AT1G75780 (0) |
| Solyc06g066570.2 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein | AT1G79810 (2.00E-130) |
| Solyc06g073860.1 | RING-H2 group F2A | AT5G22000 (4.00E-60) |
| Solyc07g048040.1 | Calcium-dependent lipid-binding (CaLB domain) family protein | AT5G55530 (2.00E-92) |
| Solyc08g006890.2 | Tubulin/FtsZ family protein | AT4G14960 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000332 | microtubule endoplasmic reticulum membrane microtubule-based process SOCS/VHL/BC-box: 3_box Transcription factor: Alfin-like Transcription regulator: TRAF E3 adaptor: BTB GTPase activity histone_binding Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000339 | glycolipid transport glycolipid binding glycolipid transporter activity microtubule-based process DUB: USP protein domain specific binding microtubule GTPase activity cytoplasm Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000363 | microtubule microtubule-based process GTPase activity fatty acid beta-oxidation acyl-CoA oxidase activity hydrolase activity, hydrolyzing O-glycosyl compounds acyl-CoA dehydrogenase activity carbohydrate metabolic process oxidoreductase activity, acting on the CH-CH group of donors fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) methyl ketone biosynthesis Peroxisome PPAR_signaling_pathway Drug_metabolism_-_other_enzymes Lysosome hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000364 | microtubule microtubule-based process GTPase activity Lysosome Drug_metabolism_-_other_enzymes hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
| CFinderADM000395 | microtubule-based process microtubule GTPase activity Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000397 | microtubule microtubule-based process GTPase activity PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family Transcription factor: bHLH Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000422 | microtubule microtubule-based process GTPase activity 4-hydroxyphenylpyruvate dioxygenase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen aromatic amino acid family metabolic process vitamin E biosynthesis (tocotrienols) plastoquinol-9 biosynthesis I phenylalanine biosynthesis (cytosolic, plants) Other_types_of_O-glycan_biosynthesis Isoquinoline_alkaloid_biosynthesis Ubiquinone_and_other_terpenoid-quinone_biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM000485 | TFIIK_complex phosphatidylinositol-mediated signaling transcription, DNA-dependent microtubule regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity phosphatidylinositol phosphorylation microtubule-based process arginine degradation I (arginase pathway) arginine degradation VI (arginase 2 pathway) proline biosynthesis III L-Nδ-acetylornithine biosynthesis | details |
| CFinderADM000494 | retromer complex retrograde transport, endosome to Golgi microtubule protein transport microtubule-based process Transcription regulator: C3H Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000521 | microtubule microtubule-based process | details |
| CFinderADM000548 | microtubule Transcription factor: faR1 tRNA dihydrouridine synthase activity Transcription regulator: C3H | details |
| CFinderADM000566 | microtubule Transcription factor: G2-like Transcription factor: bZIP microtubule-based process steroid biosynthetic process L-ascorbate biosynthesis V superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis UDP-sugars interconversion UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) Nicotinate_and_nicotinamide_metabolism Amino_sugar_and_nucleotide_sugar_metabolism | details |
| CFinderADM000605 | microtubule-based process microtubule protein domain specific binding GTPase activity Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000623 | microtubule microtubule-based process GTPase activity coenzyme A biosynthetic process fatty acid beta-oxidation pantothenate kinase activity acyl-CoA oxidase activity acyl-CoA dehydrogenase activity oxidoreductase activity, acting on the CH-CH group of donors fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) phosphopantothenate biosynthesis I mevalonate pathway I lysine degradation II methyl ketone biosynthesis Peroxisome Two-component_system PPAR_signaling_pathway Nicotinate_and_nicotinamide_metabolism Biotin_metabolism | details |
| CFinderADM000624 | microtubule microtubule-based process protein domain specific binding anthocyanidin modification (Arabidopsis) Anthocyanin_biosynthesis Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000627 | microtubule-based process microtubule GTPase activity Drug_metabolism_-_other_enzymes | details |
| CFinderADM000628 | microtubule-based process microtubule GTPase activity Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000639 | PPC:4.2.1: Calcium Dependent Protein Kinase microtubule microtubule-based process calmodulin binding GTPase activity Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000642 | nucleic acid binding DUB: USP microtubule-based process translational initiation RNA_transport | details |
| CFinderADM000772 | ferrochelatase activity heme biosynthetic process PPC:4.2.1: Calcium Dependent Protein Kinase E3 adaptor: Cullin ubiquitin protein ligase binding protein kinase activity heme biosynthesis I (aerobic) phosphatidylcholine acyl editing phospholipases Bile_secretion | details |
| CFinderADM000773 | PPC:4.2.1: Calcium Dependent Protein Kinase phosphatidylcholine acyl editing phospholipases Bile_secretion Regulation_of_lipolysis_in_adipocyte | details |
| CFinderADM000884 | microtubule microtubule-based process GTPase activity protein glycosylation galactosyltransferase activity phospholipid remodeling (phosphatidylcholine, yeast) thioredoxin pathway phosphatidylcholine acyl editing Ether_lipid_metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM000887 | E3: RING Transcription factor: C2H2 Bile_secretion | details |
| CFinderADM000919 | microtubule microtubule-based process GTPase activity jasmonic_acid_metabolic_process induced_systemic_resistance,_jasmonic_acid_mediated_signaling_pathway jasmonate-amino_synthetase_activity response to wounding kinesin complex microtubule-based movement jasmonoyl-amino acid conjugates biosynthesis II jasmonoyl-amino acid conjugates biosynthesis I Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM000931 | cysteine biosynthetic process from serine serine O-acetyltransferase activity microtubule-based process protein glycosylation galactosyltransferase activity GTPase activity microtubule seleno-amino acid biosynthesis cysteine biosynthesis I Biofilm_formation_-_vibrio_cholerae Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001068 | SAGA complex microtubule four-way junction helicase activity protein binding transcription cofactor activity DNA recombination microtubule-based process GTPase activity Taste_transduction Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM001133 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 4-hydroxyphenylpyruvate dioxygenase activity microtubule aromatic amino acid family metabolic process microtubule-based process vitamin E biosynthesis (tocotrienols) plastoquinol-9 biosynthesis I phenylalanine biosynthesis (cytosolic, plants) thioredoxin pathway Bile_secretion Selenocompound_metabolism Ubiquinone_and_other_terpenoid-quinone_biosynthesis | details |
| CFinderADM001134 | microtubule-based process microtubule Transcription factor: C2H2 thioredoxin pathway Selenocompound_metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001144 | Transcription factor: EIL Transcription factor: PLATZ Bile_secretion | details |
| CFinderADM001145 | Transcription regulator: TRAF SOCS/VHL/BC-box: 3_box Transcription factor: PLATZ E3 adaptor: BTB Bile_secretion | details |
| CFinderADM001204 | microtubule-based process microtubule GTPase activity RNA methyltransferase activity endoplasmic reticulum membrane RNA processing Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM001208 | microtubule microtubule-based process DUB: USP Transcription regulator: C3H Transcription factor: C2H2 Nicotinate_and_nicotinamide_metabolism | details |
| CFinderADM001312 | microtubule-based process microtubule protein domain specific binding GTPase activity O-methyltransferase activity β-alanine betaine biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |