TreatCFM000384 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| nickel cation binding | 0.010578583 | GO:0016151 |
| nitrogen compound metabolic process | 0.01461754 | GO:0006807 |
| steroid biosynthetic process | 0.01461754 | GO:0006694 |
| 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.033798874 | GO:0003854 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.037936247 | GO:0016616 |
| GTPase activity | 0.037936247 | GO:0003924 |
| UDP-L-rhamnose biosynthesis | 0.000719632 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc02g070670.2 | urease accessory protein G | AT2G34470 (3.00E-135) |
| Solyc03g033380.2 | SPla/RYanodine receptor (SPRY) domain-containing protein | AT1G35470 (4.00E-160) |
| Solyc03g116350.2 | HVA22 homologue A | AT1G74520 (3.00E-64) |
| Solyc07g055290.2 | Ras-related small GTP-binding family protein | AT1G06400 (3.00E-102) |
| Solyc07g062130.2 | rhamnose biosynthesis 1 | AT1G78570 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000428 | transport 3-beta-hydroxy-delta5-steroid dehydrogenase activity isomerase activity steroid biosynthetic process UDP-L-rhamnose biosynthesis trehalose degradation II (trehalase) syringetin biosynthesis flavonol biosynthesis Terpenoid backbone biosynthesis Flavonoid biosynthesis Galactose metabolism Flavonoid biosynthesis | details |
| TreatCFM000683 | peroxiredoxin activity steroid biosynthetic process FAD binding oxidation-reduction process 3-beta-hydroxy-delta5-steroid dehydrogenase activity coenzyme binding Ubiquitin_Proteasome_system, E3 adaptor: DWD UDP-L-rhamnose biosynthesis Phenylpropanoid biosynthesis Apoptosis - fly | details |
| TreatCFM000693 | autophagic vacuole assembly 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor cytoplasm UDP-L-rhamnose biosynthesis | details |
| TreatCFM000694 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor steroid biosynthetic process UDP-L-rhamnose biosynthesis | details |
| TreatCFM000857 | protein tyrosine phosphatase activity Transcription_related, Transcription factor: NF-YA Transcription_related, Transcription factor: Alfin-like Ubiquitin_Proteasome_system, E3: RING Cytochrome_P450, Cytochrome P450: CYP76B UDP-L-rhamnose biosynthesis | details |
| TreatCFM000864 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor UDP-L-rhamnose biosynthesis | details |
| TreatCFM001071 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor steroid biosynthetic process UDP-L-rhamnose biosynthesis | details |
| TreatCFM001140 | microtubule protein domain specific binding acid phosphatase activity microtubule-based process GTPase activity phosphate acquisition Tuberculosis | details |
| TreatCFM001149 | mediator complex cyclin-dependent protein kinase regulator activity protein_kinase_binding regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor steroid biosynthetic process UDP-L-rhamnose biosynthesis | details |
| TreatCFM001177 | phosphatidylinositol phosphorylation 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor UDP-L-rhamnose biosynthesis D-myo-inositol (1,4,5)-trisphosphate degradation Glycine, serine and threonine metabolism Phosphatidylinositol signaling system | details |
| TreatCFM001245 | glycolipid transport glycolipid transporter activity prenyltransferase activity glycolipid binding steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor UDP-L-rhamnose biosynthesis EGFR tyrosine kinase inhibitor resistance | details |
| TreatCFM001295 | mediator complex cyclin-dependent protein kinase regulator activity protein_kinase_binding FAD binding regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process UDP-L-rhamnose biosynthesis pyridine nucleotide cycling (plants) | details |
| TreatCFM001302 | steroid biosynthetic process protein_peptidyl-prolyl_isomerization peptidyl-prolyl cis-trans isomerase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor UDP-L-rhamnose biosynthesis Cationic antimicrobial peptide (CAMP) resistance | details |
| TreatCFM001426 | steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor aspartic-type endopeptidase activity UDP-L-rhamnose biosynthesis syringetin biosynthesis flavonol biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis | details |
| TreatCFM001476 | steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor aspartic-type endopeptidase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD UDP-L-rhamnose biosynthesis syringetin biosynthesis flavonol biosynthesis Flavonoid biosynthesis Flavonoid biosynthesis | details |
| TreatCFM001598 | protein tyrosine phosphatase activity steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor UDP-L-rhamnose biosynthesis EGFR tyrosine kinase inhibitor resistance | details |
Expression profiles
 Show details about module gene expression profiling |