Gene details

Annotation of co-expression genes

PH01000097G0900's details annotation

1.Annotation

ICBR annotation: OsFBL52 - F-box domain and LRR containing protein, expressed

Blast result AT4G33210 : 0.00E+00
Blast annotation: F-box family protein

2.Location

Scaffold: PH01000097
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000402	spliceosomal complex, nuclear mRNA splicing, via spliceosome, GRAS Transcription_Regulator(from PlantTFDB) protein binding, Spliceosome
coexpression network	CFinderM000403	GRAS Transcription_Regulator(from PlantTFDB)
coexpression network	CFinderM000496	cullin-RING ubiquitin ligase complex, ubiquitin protein ligase binding, Pseudo ARR-B Transcription_Regulator(from iTAK) ubiquitin-dependent protein catabolic process, diphosphomevalonate decarboxylase activity, L,L-diaminopimelate_aminotransferase_activity Citrate_cycle_(TCA_cycle) Pyruvate_metabolism
coexpression network	CFinderM000641	nucleotide-excision repair, Nucleotide_excision_repair single-stranded DNA binding, protein binding, nuclease activity, endonuclease activity, DNA repair,
coexpression network	CFinderM001322	ubiquitin ligase complex, protein ubiquitination, DNA_replication protein binding,
coexpression network	CFinderM001445	Nucleotide_excision_repair nucleotide-excision repair, endonuclease activity, nuclease activity, single-stranded DNA binding, protein binding, DNA repair, protein ubiquitination,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF12937.6	F-box-like	144	182

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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