CFinderM000050's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein complex,7.49E-05GO:0043234
microtubule,7.49E-05GO:0005874
structural constituent of cytoskeleton,9.42E-05GO:0005200
microtubule-based process,0.000155427GO:0007017
protein polymerization,0.000155427GO:0051258
Phagosome0.000783663KEGG
GTP_catabolic_process0.000994091GO:0006184
glycine cleavage complex,0.001604016GO:0005960
glycine decarboxylation via glycine cleavage system,0.002497162GO:0019464
GTPase activity,0.00316941GO:0003924
GTP binding,0.00479384GO:0005525
glycine catabolic process,0.007483762GO:0006546
Glyoxylate_and_dicarboxylate_metabolism0.017634235KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000079G1850Galactose oxidase/kelch repeat superfamily proteinAT3G61590 (4.00E-135)
PH01000095G0760Single hybrid motif superfamily proteinAT2G35120 (1.50E-65)
PH01000312G0930Protein of unknown function (DUF620)AT1G27690 (1.30E-46)
PH01000964G0310beta-6 tubulinAT5G12250 (0.00E+00)
PH01002277G0200beta-6 tubulinAT5G12250 (0)
PH01003212G0030-AT5G01790 (1.90E-13)
PH01005426G0040Galactose oxidase/kelch repeat superfamily proteinAT1G74150 (7.30E-42)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000158G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
microtubule,
protein complex,
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
Phagosome
protein polymerization,
microtubule-based process,
DNA binding,
structural constituent of cytoskeleton,
chromatin binding,
details
CFinderM000191TALE Transcription_Regulator(from PlantTFDB)
HB-KNOX Transcription_Regulator(from iTAK)
regulation of transcription, DNA-dependent,
HB-BELL Transcription_Regulator(from iTAK)
protein complex,
nucleus,
microtubule,
AUX/IAA Transcription_Regulator(from iTAK)
Phagosome
selenium binding,
sequence-specific DNA binding,
structural constituent of cytoskeleton,
sequence-specific DNA binding transcription factor activity,
trehalose biosynthetic process,
microtubule-based process,
protein polymerization,
details
CFinderM000609CAMTA Transcription_Regulator(from PlantTFDB)
one-carbon metabolic process,
protein polymerization,
microtubule-based process,
adenosylhomocysteinase activity,
protein binding,
Phagosome
protein complex,
microtubule,
details
CFinderM000827RLK-Pelle_RLCK-VIIb (from iTAK)
RLK-Pelle_LRR-III (from iTAK)
microtubule,
protein complex,
Selenocompound_metabolism
apoplast,
methionine biosynthetic process,
cellular amino acid biosynthetic process,
microtubule-based process,
protein polymerization,
lignin catabolic process,
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity,
Phagosome
Cysteine_and_methionine_metabolism
details
CFinderM000828Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
microtubule,
protein complex,
RLK-Pelle_LRR-III (from iTAK)
3-deoxy-7-phosphoheptulonate synthase activity,
microtubule-based process,
protein polymerization,
aromatic amino acid family biosynthetic process,
Phagosome
structural constituent of cytoskeleton,
details

4.Expression profilings