CFinderM000454's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
DNA replication, synthesis of RNA primer,0.000937412GO:0006269
DNA primase activity,0.009373388GO:0003896

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000718G0260PPPDE putative thiol peptidase family proteinAT1G47740 (2.30E-44)
PH01001015G0430RNA-binding (RRM/RBD/RNP motifs) family proteinAT1G02840 (3.20E-60)
PH01001251G0240-- (-)
PH01002571G0210Transducin/WD40 repeat-like superfamily proteinAT5G07590 (0.00E+00)
PH01002867G0140DNA primases;DNA primasesAT5G41880 (4.00E-58)
PH01004186G0100-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000080DNA replication, synthesis of RNA primer,
CBM43 Carbohydrate-Binding_Modules
GH17 Glycoside_Hydrolases
DNA primase activity,
details
CFinderM000886Spliceosome
RNA_degradation
details
CFinderM001109RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
details
CFinderM001358spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
details
CFinderM001361transcription factor TFIIF complex,
protein_oligomerization
cell communication,
transcription initiation from RNA polymerase II promoter,
Basal_transcription_factors
phosphatidylinositol binding,
chaperone binding,
bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM001372Spliceosome
GT32 GlycosylTransferases
Golgi stack,
AGC_NDR (from iTAK)
GTnc GlycosylTransferases
thiol oxidase activity,
nucleotide binding,
snRNA_binding
details
CFinderM001805Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
details
CFinderM001814Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
details

4.Expression profilings