CFinderM000764's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RNA-dependent DNA replication,0.001098277GO:0006278
RNA-directed DNA polymerase activity,0.00174602GO:0003964
protein import into mitochondrial outer membrane,0.005349556GO:0045040
vacuolar transport,0.005349556GO:0007034
mitochondrial outer membrane translocase complex,0.008197999GO:0005742
retromer complex,0.008197999GO:0030904
cell communication,0.009620778GO:0007154
mTERF Transcription_Regulator(from iTAK)0.011196699GFam
myosin complex,0.01947518GO:0016459
phosphoric ester hydrolase activity,0.025450165GO:0042578
phosphatidylinositol binding,0.025450165GO:0035091
motor activity,0.025450165GO:0003774
RNA binding,0.025450165GO:0003723

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G1680sorting nexin 1AT5G06140 (7.00E-120)
PH01000005G3860-AT5G15880 (6.20E-29)
PH01000121G0390myosin heavy chain-relatedAT5G53310 (2.40E-47)
PH01000362G1190Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G41950 (1.50E-95)
PH01000648G0520SAC domain-containing protein 8AT3G51830 (1.70E-72)
PH01000771G0560-- (-)
PH01000866G0550vacuolar protein sorting 26AAT5G53530 (8.00E-145)
PH01001364G0200GTP-binding protein 1AT5G52210 (1.60E-46)
PH01003506G0010Mitochondrial transcription termination factor family proteinAT2G44020 (2.00E-110)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000131GT13 GlycosylTransferases
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
Golgi membrane,
proton-transporting V-type ATPase, V0 domain,
details
CFinderM000763retromer complex,
Golgi_transport_complex
intra-Golgi vesicle-mediated transport,
vacuolar transport,
RNA-dependent DNA replication,
details
CFinderM001117LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
details
CFinderM001376cis-Golgi network,
cell communication,
phosphatidylinositol binding,
details
CFinderM001745GT13 GlycosylTransferases
Golgi membrane,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
N-Glycan_biosynthesis
Glycerolipid_metabolism
Various_types_of_N-glycan_biosynthesis
Glycerophospholipid_metabolism
transferase activity, transferring acyl groups,
acetylglucosaminyltransferase activity,
protein glycosylation,
details

4.Expression profilings


Show details about module gene expression profiling