CFinderM000790's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRR-VIII-1 (from iTAK)0.011837853GFam
CMGC_CDK-CRK7-CDK9 (from iTAK)0.011837853GFam
GARP-G2-like Transcription_Regulator(from iTAK)0.032600952GFam
G2-like Transcription_Regulator(from PlantTFDB)0.032600952GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000461G0530RING/U-box superfamily proteinAT2G20650 (1.60E-96)
PH01000528G0960Leucine-rich repeat protein kinase family proteinAT5G37450 (2.00E-119)
PH01000542G0130Homeodomain-like superfamily proteinAT5G29000 (1.60E-52)
PH01000639G0630-AT4G25670 (3.10E-19)
PH01000658G0120RING/U-box superfamily proteinAT4G28370 (2.00E-133)
PH01001710G0310NOP56-like pre RNA processing ribonucleoproteinAT3G05060 (8.00E-140)
PH01002050G0070Phosphatidate cytidylyltransferase family proteinAT5G58560 (8.10E-46)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000347Pantothenate_and_CoA_biosynthesis
Valine,_leucine_and_isoleucine_degradation
CMGC_CDK-CRK7-CDK9 (from iTAK)
pantothenate kinase activity,
coenzyme A biosynthetic process,
Propanoate_metabolism
beta-Alanine_metabolism
details
CFinderM000420Protein_export
defense response,
signal recognition particle,
7S RNA binding,
ADP_binding
SRP-dependent cotranslational protein targeting to membrane,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
details
CFinderM000474CAMK_CAMKL-CHK1 (from iTAK)
eukaryotic translation initiation factor 3 complex,
details
CFinderM000816CMGC_CDK-CRK7-CDK9 (from iTAK)
details
CFinderM000966TKL-Pl-1 (from iTAK)
CMGC_CDK-CRK7-CDK9 (from iTAK)
protein phosphorylation,
chloride transport,
CAMK_CAMKL-CHK1 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
voltage-gated chloride channel activity,
protein kinase activity,
ion channel activity,
ATP binding,
details
CFinderM000974CMGC_CDKL-Os (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
Glycerolipid_metabolism
details
CFinderM001179Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
details
CFinderM001469FAR1 Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
RNA_degradation
membrane,
details
CFinderM001685ARID Transcription_Regulator(from iTAK)
NAD+ ADP-ribosyltransferase activity,
details

4.Expression profilings